Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   QOR58_RS11165 Genome accession   NZ_OX460941
Coordinates   2174982..2176211 (+) Length   409 a.a.
NCBI ID   WP_000728353.1    Uniprot ID   -
Organism   Streptococcus agalactiae isolate MRI Z2-304     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2169982..2181211
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOR58_RS11140 - 2171144..2173723 (+) 2580 WP_283571693.1 YfhO family protein -
  QOR58_RS11160 rlmH 2174302..2174781 (-) 480 WP_000768336.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  QOR58_RS11165 htrA 2174982..2176211 (+) 1230 WP_000728353.1 trypsin-like peptidase domain-containing protein Regulator
  QOR58_RS11170 spo0J 2176309..2177082 (+) 774 WP_000456084.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 409 a.a.        Molecular weight: 43106.49 Da        Isoelectric Point: 9.3934

>NTDB_id=1159161 QOR58_RS11165 WP_000728353.1 2174982..2176211(+) (htrA) [Streptococcus agalactiae isolate MRI Z2-304]
MKKKLVSSLLKCSLIIIVSFAGGAFASFVMNHNDNIPNGGVTKTSKVNYNNITPTTKAVKKGQNSVVSVINYKQQESRSD
LSDFYSHFFGNQGDNTDKGLQVYGEGSGVIYKKDGKNAYVVTNNHVIDGAKQIEIQLADGSKAVGKLVGSDTYSDLAVVK
IPSDKVSNIAEFADSSKLNIGETAIAIGSPLGTEYANSVTQGIVSSLKRTVTMTNEEGQTVSTNAIQTDAAINPGNSGGA
LINIEGQVIGINSSKISSTSNQTSGQSSGNSVEGMGFAIPSNDVVKIINQLESNGQVERPALGISMAGLSNLPSDVISKL
KIPSNVTNGIVVASIQSGMPAQGKLKKYDVITKVDDKEVASPSDLQSLLYGHQVGDSITVTFYRGENKQTVTIKLTKTSK
DLAKQRANN

Nucleotide


Download         Length: 1230 bp        

>NTDB_id=1159161 QOR58_RS11165 WP_000728353.1 2174982..2176211(+) (htrA) [Streptococcus agalactiae isolate MRI Z2-304]
GTGAAAAAAAAATTAGTCTCATCACTTCTAAAGTGTTCTCTAATCATTATTGTTAGCTTTGCTGGTGGAGCATTTGCTAG
TTTTGTCATGAATCATAATGACAATATTCCAAATGGTGGTGTCACTAAAACTAGTAAAGTAAATTATAATAACATAACGC
CTACAACAAAAGCTGTTAAAAAGGGACAAAATAGTGTTGTTTCTGTTATCAATTATAAACAACAAGAGAGTCGTTCTGAC
CTATCAGACTTCTATAGTCATTTTTTTGGTAATCAGGGGGACAACACTGATAAGGGCTTACAAGTTTACGGTGAAGGCTC
TGGAGTCATCTATAAAAAAGATGGTAAAAATGCCTATGTTGTCACTAATAACCACGTCATTGATGGGGCTAAACAAATTG
AAATTCAACTAGCTGATGGCTCAAAAGCAGTTGGGAAACTTGTTGGGTCAGATACCTACTCTGATTTAGCCGTCGTCAAA
ATTCCATCAGATAAAGTTTCAAATATTGCAGAATTTGCTGATTCATCAAAACTCAACATTGGTGAAACTGCTATAGCGAT
CGGAAGCCCTCTTGGAACTGAGTATGCAAATTCTGTAACTCAAGGTATTGTATCTAGTTTAAAAAGAACTGTAACAATGA
CTAATGAAGAAGGACAAACAGTTTCTACAAATGCTATCCAGACTGATGCTGCTATCAATCCTGGTAATTCAGGTGGAGCA
CTTATCAATATTGAAGGACAGGTTATTGGAATTAATTCTAGTAAAATTTCTTCTACATCAAATCAAACCTCAGGACAATC
GTCAGGAAATAGCGTTGAAGGTATGGGATTTGCCATTCCTTCAAATGATGTTGTTAAGATTATCAATCAACTTGAGAGTA
ACGGACAAGTAGAGAGACCTGCTCTAGGTATTTCTATGGCTGGATTAAGTAATTTACCATCCGATGTTATTAGTAAACTG
AAAATCCCAAGTAATGTTACTAATGGTATTGTAGTAGCATCTATCCAATCTGGCATGCCAGCTCAAGGCAAACTAAAGAA
ATACGATGTCATTACTAAAGTTGACGATAAAGAAGTAGCATCTCCAAGTGATTTACAAAGTTTACTCTATGGCCACCAGG
TAGGGGATTCCATAACAGTAACCTTTTATCGTGGTGAAAATAAACAAACAGTCACTATAAAACTTACTAAAACTAGTAAA
GATTTAGCTAAACAACGAGCAAATAACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

63.104

96.088

0.606

  htrA Streptococcus gordonii str. Challis substr. CH1

57.107

98.044

0.56

  htrA Streptococcus mitis NCTC 12261

56.281

97.311

0.548

  htrA Streptococcus pneumoniae TIGR4

54.791

99.511

0.545

  htrA Streptococcus pneumoniae Rx1

54.791

99.511

0.545

  htrA Streptococcus pneumoniae D39

54.791

99.511

0.545

  htrA Streptococcus pneumoniae R6

54.791

99.511

0.545


Multiple sequence alignment