Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   QNH80_RS07745 Genome accession   NZ_OX352996
Coordinates   1571160..1572356 (-) Length   398 a.a.
NCBI ID   WP_009911075.1    Uniprot ID   G7SHV4
Organism   Streptococcus suis isolate 861160_dhsdS     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1566160..1577356
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH80_RS07720 - 1566283..1566486 (-) 204 WP_011922523.1 DUF951 family protein -
  QNH80_RS07725 - 1566496..1567377 (-) 882 WP_011921629.1 diacylglycerol kinase family protein -
  QNH80_RS07730 dnaN 1567469..1568605 (-) 1137 WP_004194538.1 DNA polymerase III subunit beta -
  QNH80_RS07735 dnaA 1568759..1570132 (-) 1374 WP_023368958.1 chromosomal replication initiator protein DnaA -
  QNH80_RS07740 spo0J 1570335..1571099 (-) 765 WP_014638879.1 ParB/RepB/Spo0J family partition protein Regulator
  QNH80_RS07745 htrA 1571160..1572356 (-) 1197 WP_009911075.1 trypsin-like peptidase domain-containing protein Regulator
  QNH80_RS07750 rlmH 1572530..1573009 (+) 480 WP_012028058.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  QNH80_RS07755 - 1573034..1573717 (+) 684 WP_012775416.1 YoaK family protein -
  QNH80_RS07775 - 1574118..1576697 (-) 2580 WP_012028056.1 YfhO family protein -

Sequence


Protein


Download         Length: 398 a.a.        Molecular weight: 41818.83 Da        Isoelectric Point: 4.6655

>NTDB_id=1155643 QNH80_RS07745 WP_009911075.1 1571160..1572356(-) (htrA) [Streptococcus suis isolate 861160_dhsdS]
MERIPYMKKYLKFAILFVIGFFGGLIGALSASFFQPRVQQANSAITSVSNVQYNNETSTTKAVEKVQNAVVSVINYQKSA
NNSLGAIFGNIESSDELAVAGEGSGVIYKKDGQYAYIVTNTHVINNAEKIDILLASGEKISGELVGSDTYSDIAVIKISA
DKVTAVAEFADSDTIKVGETAIAIGSPLGSVYANTVTQGIISSLSRTVTSQSKDGQTISTNAIQTDTAINPGNSGGPLIN
TQGQVIGITSSKITSSSANSSGVAVEGLGFAIPANDAVAIINQLEKTGQVSRPALGVHMVNLTTLSTSQLEKAGLSNTEL
TSGVVIVSTQSGLPADGKLETFDVITEIDGEAIQNKSDLQSALYKHQIGDTITVTYYRNNQKQTVDIKLTHSTEELSE

Nucleotide


Download         Length: 1197 bp        

>NTDB_id=1155643 QNH80_RS07745 WP_009911075.1 1571160..1572356(-) (htrA) [Streptococcus suis isolate 861160_dhsdS]
ATGGAAAGGATTCCTTATATGAAAAAATATTTGAAATTTGCGATTTTATTTGTAATTGGATTTTTTGGGGGTCTTATCGG
GGCCTTATCAGCCTCTTTCTTCCAGCCACGGGTTCAACAAGCAAATTCTGCCATCACTAGTGTCAGCAATGTTCAATATA
ATAATGAAACTTCTACTACAAAGGCTGTAGAGAAAGTACAAAATGCTGTTGTGTCTGTTATTAATTACCAAAAGTCAGCC
AACAATAGTCTTGGTGCTATCTTTGGAAATATTGAATCATCTGACGAACTAGCCGTTGCTGGGGAGGGATCTGGTGTTAT
CTACAAAAAAGATGGTCAATATGCCTATATTGTGACAAATACGCATGTTATTAATAACGCAGAAAAGATTGATATCCTTT
TAGCATCTGGAGAAAAAATTAGCGGTGAACTTGTTGGTTCTGATACCTATTCTGATATAGCTGTTATAAAAATATCAGCA
GATAAAGTCACTGCTGTTGCTGAATTTGCTGATTCCGATACAATTAAAGTTGGAGAAACTGCTATCGCAATTGGTAGTCC
TCTAGGTAGCGTCTACGCCAATACAGTTACCCAGGGTATTATTTCTAGCTTAAGTCGGACAGTTACTTCACAATCAAAAG
ATGGACAAACAATCTCAACTAACGCTATTCAAACTGATACAGCTATCAACCCTGGAAACTCTGGCGGACCGTTAATCAAT
ACCCAAGGACAAGTGATAGGCATTACCTCTAGCAAAATTACCTCAAGTTCTGCAAATAGCTCAGGCGTGGCTGTAGAAGG
GTTGGGATTTGCTATTCCTGCAAATGATGCCGTAGCTATTATCAATCAGCTTGAAAAAACTGGACAAGTTAGCCGACCTG
CTCTTGGAGTTCATATGGTTAACTTGACGACCTTGTCAACTAGTCAATTAGAAAAAGCTGGATTATCAAATACGGAATTA
ACATCCGGTGTAGTAATTGTCTCTACACAAAGTGGGCTACCTGCAGATGGAAAATTAGAAACTTTTGATGTTATTACTGA
GATTGACGGAGAAGCTATTCAAAATAAGAGTGACCTCCAGAGCGCTCTCTACAAACATCAAATTGGAGATACAATCACTG
TAACTTATTACCGCAATAATCAGAAACAAACTGTTGACATTAAGTTGACACATTCTACAGAAGAACTTAGCGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G7SHV4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

59.446

99.749

0.593

  htrA Streptococcus gordonii str. Challis substr. CH1

59.494

99.246

0.59

  htrA Streptococcus pneumoniae D39

57.252

98.744

0.565

  htrA Streptococcus pneumoniae TIGR4

57.252

98.744

0.565

  htrA Streptococcus mitis NCTC 12261

57.252

98.744

0.565

  htrA Streptococcus pneumoniae R6

57.252

98.744

0.565

  htrA Streptococcus pneumoniae Rx1

57.252

98.744

0.565


Multiple sequence alignment