Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   QNH80_RS07740 Genome accession   NZ_OX352996
Coordinates   1570335..1571099 (-) Length   254 a.a.
NCBI ID   WP_014638879.1    Uniprot ID   G7SHV5
Organism   Streptococcus suis isolate 861160_dhsdS     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1565335..1576099
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH80_RS07715 - 1565820..1566179 (-) 360 WP_012774878.1 helix-turn-helix transcriptional regulator -
  QNH80_RS07720 - 1566283..1566486 (-) 204 WP_011922523.1 DUF951 family protein -
  QNH80_RS07725 - 1566496..1567377 (-) 882 WP_011921629.1 diacylglycerol kinase family protein -
  QNH80_RS07730 dnaN 1567469..1568605 (-) 1137 WP_004194538.1 DNA polymerase III subunit beta -
  QNH80_RS07735 dnaA 1568759..1570132 (-) 1374 WP_023368958.1 chromosomal replication initiator protein DnaA -
  QNH80_RS07740 spo0J 1570335..1571099 (-) 765 WP_014638879.1 ParB/RepB/Spo0J family partition protein Regulator
  QNH80_RS07745 htrA 1571160..1572356 (-) 1197 WP_009911075.1 trypsin-like peptidase domain-containing protein Regulator
  QNH80_RS07750 rlmH 1572530..1573009 (+) 480 WP_012028058.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  QNH80_RS07755 - 1573034..1573717 (+) 684 WP_012775416.1 YoaK family protein -

Sequence

Protein


Download         Length: 254 a.a.        Molecular weight: 28966.21 Da        Isoelectric Point: 9.1678

>NTDB_id=1155642 QNH80_RS07740 WP_014638879.1 1570335..1571099(-) (spo0J) [Streptococcus suis isolate 861160_dhsdS]
MEELRTLNISEIHPNPYQPRIHFDEKELLELAQSIKENGLIQPIIVRKSSIIGYELLAGERRLRASQLAGLTTIPAVVKE
LTDDDLLYQAIIENLQRSNLNPIEEAASYQKLISRGLTHDEVAQIMGKSRPYISNLLRLLNLSSQTKQAVEEGQISQGHA
RQLVSFSEEKQAEWVQLILSKDLSVRTLEKLIAANKKKHTKLKQRDQFLKEQEDSLSKTLGTATKIIKKKNGSGEIRISF
NDLDEFERIINNFK

Nucleotide


Download         Length: 765 bp        

>NTDB_id=1155642 QNH80_RS07740 WP_014638879.1 1570335..1571099(-) (spo0J) [Streptococcus suis isolate 861160_dhsdS]
ATGGAAGAATTACGTACACTAAATATTTCAGAAATCCATCCCAATCCCTATCAGCCAAGAATTCATTTTGATGAAAAGGA
GCTACTTGAGCTCGCTCAATCCATTAAGGAAAATGGATTAATTCAACCGATTATTGTAAGAAAATCTTCTATTATCGGAT
ACGAATTATTAGCTGGAGAAAGAAGGTTGCGAGCCAGTCAATTAGCTGGACTGACTACAATACCAGCAGTGGTAAAGGAA
CTAACTGATGATGATTTACTATATCAGGCTATCATAGAGAATCTACAGCGTTCTAACTTAAATCCGATAGAAGAAGCAGC
CTCTTATCAAAAATTGATTAGTAGAGGGTTAACGCATGATGAAGTTGCTCAAATCATGGGAAAATCAAGACCATATATCA
GTAATTTATTGCGCCTACTAAATCTATCATCTCAGACTAAACAAGCTGTAGAAGAAGGACAAATTTCACAAGGGCACGCG
CGACAATTGGTGTCATTTTCAGAAGAAAAGCAAGCCGAATGGGTTCAACTCATTTTATCAAAAGATTTAAGTGTGCGTAC
GCTTGAAAAATTAATAGCTGCAAATAAGAAAAAACACACTAAGCTTAAACAACGCGACCAATTTTTAAAAGAACAGGAAG
ATTCACTCAGTAAAACTCTTGGAACAGCTACAAAAATTATCAAGAAGAAAAACGGGAGCGGAGAAATTCGGATTAGCTTT
AATGACCTCGATGAATTCGAAAGAATTATCAACAATTTTAAATAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(146-193)

ParB/Sulfiredoxin domain (ParB_N)

(7-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G7SHV5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

55.159

99.213

0.547

Multiple sequence alignment