Detailed information NTG1152595

Bioinformatically predicted

Overview

• Name: dprA/cilB/dalA
• Type: Machinery gene
• Locus tag: NBW44_RS03940
• Genome accession: NZ_OW724079
• Coordinates: 789417..790274 (-)
• Length: 285 a.a.
• NCBI ID: WP_349815551.1
• Uniprot ID: -
• Organism: Streptococcus sp. Marseille-Q3533
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 784417..795274

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NBW44_RS03915	-	785009..785281 (-)	273	WP_250307292.1	DUF1294 domain-containing protein	-
NBW44_RS03920	-	785315..785974 (-)	660	WP_250307293.1	MmcQ/YjbR family DNA-binding protein	-
NBW44_RS03925	-	786019..786651 (-)	633	WP_250307294.1	copper homeostasis protein CutC	-
NBW44_RS03930	-	786743..787102 (-)	360	WP_250307295.1	YbaN family protein	-
NBW44_RS03935	topA	787210..789297 (-)	2088	WP_250307296.1	type I DNA topoisomerase	-
NBW44_RS03940	dprA/cilB/dalA	789417..790274 (-)	858	WP_349815551.1	DNA-processing protein DprA	Machinery gene
NBW44_RS03945	dapA	790386..791321 (-)	936	WP_075567642.1	4-hydroxy-tetrahydrodipicolinate synthase	-
NBW44_RS03950	-	791623..792699 (-)	1077	WP_250307298.1	aspartate-semialdehyde dehydrogenase	-
NBW44_RS03955	-	792838..793587 (-)	750	WP_250307299.1	class A sortase	-

Sequence

Protein

• Length: 285 a.a.
• Molecular weight: 31722.65 Da
• Isoelectric Point: 5.9753

>NTDB_id=1152595 NBW44_RS03940 WP_349815551.1 789417..790274(-) (dprA/cilB/dalA) [Streptococcus sp. Marseille-Q3533]
MKIDNFEIYKLKKAGLSNLQVLKVLQYGEIYDQELTLETIAEASECRNPVVFMERYYKLTFESMEKLKTDFEKFPSFSIL
DDVYPFSLCEIYDAPVLLFYKGDLNLLKLPKVAVVGSRSCSQVGIKSVGKVIQGLENELVIVSGLARGIDTAAHMSILQN
GGKTIAVIGTGLDNFYPKSNKRLQNYIGEHHLLLSEYGPGEEPLKYHFPARNRIIAGLCRGVIVAEAKMRSGSLITCERA
MEEGRDVFAIPGSILDGRSDGCHHLIQEGAKLITSGQDVLAEFEF

Nucleotide

• Length: 858 bp

>NTDB_id=1152595 NBW44_RS03940 WP_349815551.1 789417..790274(-) (dprA/cilB/dalA) [Streptococcus sp. Marseille-Q3533]
ATTAAAATTGATAATTTCGAAATCTATAAATTGAAGAAAGCTGGTTTAAGCAATCTGCAGGTATTAAAGGTACTTCAATA
TGGAGAAATTTACGATCAAGAATTAACCTTAGAAACTATAGCGGAAGCATCAGAGTGTCGAAATCCAGTGGTTTTTATGG
AGCGTTATTATAAATTGACCTTTGAAAGCATGGAAAAATTAAAAACTGACTTTGAAAAATTTCCATCATTCTCCATTTTA
GATGATGTCTATCCTTTTTCTCTTTGTGAGATATATGATGCACCAGTCTTACTATTTTATAAAGGAGATTTAAATCTCTT
GAAATTACCGAAAGTAGCTGTTGTAGGTAGTCGCTCTTGTAGTCAAGTTGGAATTAAATCTGTAGGAAAAGTTATTCAAG
GACTAGAAAATGAATTGGTTATCGTTAGTGGTTTAGCCAGAGGAATAGATACAGCAGCTCATATGTCTATTTTACAAAAT
GGAGGCAAAACCATTGCAGTTATTGGTACAGGACTTGATAATTTTTATCCAAAATCAAATAAACGTTTGCAAAATTATAT
TGGAGAACACCATTTGCTCCTAAGCGAATACGGGCCAGGTGAAGAACCTTTAAAATATCATTTCCCAGCAAGAAATCGTA
TTATAGCCGGCTTATGCAGAGGAGTGATTGTTGCAGAAGCAAAGATGAGGTCAGGAAGTTTGATTACTTGTGAACGTGCA
ATGGAAGAAGGTAGAGATGTCTTTGCTATACCCGGTAGTATTTTAGACGGTCGTTCAGACGGTTGTCATCATTTAATCCA
AGAAGGGGCAAAACTCATTACGAGTGGACAAGACGTCTTAGCAGAATTTGAATTTTAG

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (78-274)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (3-60)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	81.404	100	0.814
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	80.702	100	0.807
dprA/cilB/dalA	Streptococcus pneumoniae D39	80.702	100	0.807
dprA/cilB/dalA	Streptococcus pneumoniae R6	80.702	100	0.807
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	80.702	100	0.807
dprA/cilB/dalA	Streptococcus mitis SK321	80.351	100	0.804
dprA	Streptococcus mutans UA159	62.544	99.298	0.621
dprA	Lactococcus lactis subsp. cremoris KW2	56.228	98.596	0.554
dprA	Latilactobacillus sakei subsp. sakei 23K	44.538	83.509	0.372