Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | CJH_RS05350 | Genome accession | NZ_CP006851 |
| Coordinates | 1020372..1020674 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni subsp. jejuni F38011 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1015372..1025674
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CJH_RS05325 (CJH_05390) | rpsR | 1015734..1015994 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| CJH_RS05330 (CJH_05395) | lon | 1016055..1018430 (-) | 2376 | WP_002868636.1 | endopeptidase La | - |
| CJH_RS05335 (CJH_05400) | - | 1018447..1019094 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| CJH_RS05340 (CJH_05405) | fliW | 1019255..1019644 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| CJH_RS05345 (CJH_05410) | proC | 1019644..1020375 (+) | 732 | WP_041160133.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| CJH_RS05350 (CJH_05415) | ctsT | 1020372..1020674 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| CJH_RS05355 (CJH_05420) | - | 1020671..1021333 (+) | 663 | WP_002859149.1 | hypothetical protein | - |
| CJH_RS05360 (CJH_05425) | - | 1021330..1021782 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| CJH_RS05365 (CJH_05430) | hemD | 1021779..1022408 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| CJH_RS05370 (CJH_05435) | thiE | 1022386..1023018 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| CJH_RS05375 (CJH_05440) | thiD | 1023008..1023820 (-) | 813 | WP_002867189.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| CJH_RS05380 (CJH_05445) | - | 1023817..1024503 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| CJH_RS05385 (CJH_05450) | - | 1024500..1025261 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=114430 CJH_RS05350 WP_002853046.1 1020372..1020674(+) (ctsT) [Campylobacter jejuni subsp. jejuni F38011]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=114430 CJH_RS05350 WP_002853046.1 1020372..1020674(+) (ctsT) [Campylobacter jejuni subsp. jejuni F38011]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |