Detailed information NTG1141394

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: DQN79_RS03130
• Genome accession: NZ_LS483435
• Coordinates: 613319..614536 (+)
• Length: 405 a.a.
• NCBI ID: WP_003775241.1
• Uniprot ID: D4DUZ6
• Organism: Neisseria elongata subsp. glycolytica strain NCTC11050
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 608319..619536

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQN79_RS03120 (NCTC11050_00590)	lysS	609479..610990 (+)	1512	WP_003775235.1	lysine--tRNA ligase	-
DQN79_RS03125 (NCTC11050_00591)	-	611344..613194 (+)	1851	WP_003775239.1	ABC transporter ATP-binding protein	-
DQN79_RS03130 (NCTC11050_00592)	dprA	613319..614536 (+)	1218	WP_003775241.1	DNA-processing protein DprA	Machinery gene
DQN79_RS03135 (NCTC11050_00593)	-	614576..615031 (+)	456	WP_003775243.1	DUF494 domain-containing protein	-
DQN79_RS03140 (NCTC11050_00594)	topA	615150..617456 (+)	2307	WP_003775245.1	type I DNA topoisomerase	-
DQN79_RS03145 (NCTC11050_00595)	rsmD	617595..618164 (+)	570	WP_041961234.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
DQN79_RS03150 (NCTC11050_00596)	-	618274..618525 (+)	252	WP_049249225.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 405 a.a.
• Molecular weight: 43615.59 Da
• Isoelectric Point: 5.8412

>NTDB_id=1141394 DQN79_RS03130 WP_003775241.1 613319..614536(+) (dprA) [Neisseria elongata subsp. glycolytica strain NCTC11050]
MTTEQERHYWLRLALVPHIGAESFLQLIRHFGTATAAWQADAAAVRQVLVRKAAQEAWANRRGEAEQAAEAAEKWSEQEN
CRLLLLCDEDFPAMLSEGITPPPMLFVRGNVELLHRPSVAIVGSRHATPQALRIAHDFGRSLSERGISVVSGMAAGIDAA
AHRGALAAGGGTVAFWGTGIDRIYPSSNRELAYELGEKGAIVSEFPLGTRPLAGNFPRRNRLIAALSQAVLVVEAALESG
SLITARLAGEMGREVLAVPGSIDNPHSKGCHKLIKEGAKLTESLEDILQECPQLLPESAASSYSIYKETPVRRKISVSLA
AETDEDRKEVVENKEYRPSETPLPPATASNDAAALLEKMGYGPIHPDTLAEQLNKNAADIYAALLELELGGLVAAMPGGR
YQRIG

Nucleotide

• Length: 1218 bp

>NTDB_id=1141394 DQN79_RS03130 WP_003775241.1 613319..614536(+) (dprA) [Neisseria elongata subsp. glycolytica strain NCTC11050]
ATGACTACTGAACAAGAACGACATTACTGGCTGCGGCTGGCACTGGTGCCGCACATCGGCGCGGAAAGCTTCCTGCAGCT
TATCCGCCATTTCGGCACGGCCACCGCCGCGTGGCAGGCGGATGCCGCAGCCGTACGGCAAGTACTGGTGCGCAAAGCCG
CGCAGGAAGCATGGGCAAACCGGCGCGGAGAAGCCGAACAGGCCGCCGAAGCCGCCGAAAAATGGTCGGAACAGGAAAAC
TGCCGCCTGCTGCTGTTGTGCGACGAAGACTTCCCCGCCATGCTGTCCGAAGGCATCACCCCGCCGCCGATGCTGTTCGT
CCGCGGCAACGTCGAATTGTTGCACCGCCCGTCCGTGGCCATAGTCGGCAGCCGCCACGCTACCCCGCAGGCACTGCGTA
TCGCCCACGACTTCGGCCGCAGCCTGTCCGAGCGCGGGATTTCCGTCGTTTCGGGCATGGCCGCCGGCATCGATGCGGCC
GCCCATCGCGGCGCATTGGCGGCCGGCGGCGGCACCGTGGCCTTTTGGGGGACGGGCATAGACCGCATCTATCCGTCGTC
CAACCGCGAACTGGCCTATGAACTCGGCGAAAAAGGTGCGATCGTATCCGAATTTCCGCTCGGCACCCGCCCGCTGGCAG
GCAACTTCCCGCGCCGCAACCGCCTGATAGCCGCACTCTCGCAGGCCGTATTGGTCGTTGAAGCCGCCTTGGAATCGGGT
TCGCTGATTACCGCGCGGCTGGCGGGCGAAATGGGGCGCGAGGTGCTGGCCGTTCCCGGCTCGATAGACAACCCCCACAG
CAAAGGCTGCCACAAACTGATTAAAGAGGGCGCGAAACTGACCGAATCGCTGGAAGACATCCTGCAGGAATGCCCGCAAC
TGTTGCCAGAAAGTGCCGCTTCATCATATTCTATATATAAGGAAACGCCCGTACGGCGGAAAATTTCCGTCAGCCTTGCG
GCAGAAACGGACGAAGATCGGAAAGAAGTTGTTGAAAACAAAGAATACAGGCCGTCTGAAACCCCGCTTCCCCCGGCGAC
GGCCTCAAACGATGCCGCCGCCCTGCTTGAGAAAATGGGCTACGGCCCCATACATCCCGACACTTTGGCCGAACAGCTGA
ACAAAAACGCGGCCGACATTTACGCCGCCCTGTTGGAATTGGAACTGGGCGGACTCGTTGCCGCCATGCCGGGCGGGCGT
TACCAACGCATCGGATAA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (340-399)

• DNA recombination-mediator protein A (DNA_processg_A) (77-281)

3D structure

• AlphaFold DB: D4DUZ6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Neisseria gonorrhoeae MS11	64.619	100	0.649
dprA	Neisseria gonorrhoeae strain FA1090	64.619	100	0.649
dprA	Neisseria meningitidis strain C311	64.532	100	0.647
dprA	Neisseria meningitidis MC58	64.532	100	0.647
dprA	Vibrio cholerae strain A1552	37.871	99.753	0.378
dprA	Glaesserella parasuis strain SC1401	38.01	96.79	0.368