Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | DQM63_RS10525 | Genome accession | NZ_LS483385 |
| Coordinates | 2112833..2113798 (-) | Length | 321 a.a. |
| NCBI ID | WP_002901707.1 | Uniprot ID | - |
| Organism | Streptococcus sanguinis strain NCTC7863 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2107833..2118798
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM63_RS10505 (NCTC7863_02073) | folP | 2108815..2109768 (-) | 954 | WP_002901699.1 | dihydropteroate synthase | - |
| DQM63_RS10510 (NCTC7863_02074) | - | 2109963..2110601 (-) | 639 | WP_002901701.1 | hypothetical protein | - |
| DQM63_RS10515 (NCTC7863_02075) | - | 2110719..2111468 (-) | 750 | WP_032909647.1 | CPBP family intramembrane glutamic endopeptidase | - |
| DQM63_RS10520 (NCTC7863_02076) | - | 2111603..2112796 (-) | 1194 | WP_002901705.1 | acetate kinase | - |
| DQM63_RS10525 (NCTC7863_02077) | comYH | 2112833..2113798 (-) | 966 | WP_002901707.1 | class I SAM-dependent methyltransferase | Machinery gene |
| DQM63_RS10530 (NCTC7863_02078) | comGG | 2113880..2114269 (-) | 390 | WP_002901710.1 | competence type IV pilus minor pilin ComGG | - |
| DQM63_RS10535 (NCTC7863_02079) | comGF/cglF | 2114250..2114687 (-) | 438 | WP_002901713.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| DQM63_RS10540 (NCTC7863_02080) | comGE/cglE | 2114671..2114964 (-) | 294 | WP_002914478.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| DQM63_RS10545 (NCTC7863_02081) | comYD | 2114930..2115364 (-) | 435 | WP_002901717.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| DQM63_RS10550 (NCTC7863_02082) | comYC | 2115324..2115641 (-) | 318 | WP_002896769.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DQM63_RS10555 (NCTC7863_02083) | comYB | 2115641..2116675 (-) | 1035 | WP_263281106.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DQM63_RS10560 (NCTC7863_02084) | comYA | 2116605..2117546 (-) | 942 | WP_002901721.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DQM63_RS10565 (NCTC7863_02085) | - | 2117676..2118056 (-) | 381 | WP_002901723.1 | DUF1033 family protein | - |
Sequence
Protein
Download Length: 321 a.a. Molecular weight: 36656.63 Da Isoelectric Point: 4.6183
>NTDB_id=1139652 DQM63_RS10525 WP_002901707.1 2112833..2113798(-) (comYH) [Streptococcus sanguinis strain NCTC7863]
MNFEKIEQAYTLILENVQNIQNALATNFYDALIEQNGIYLDGDTDLQEVLTNDEKIRALHLNKEEWRRAYQFILMKAAQT
EPMQVNHQFTPDTIGFLITFLLDQLAHGEEADVLEIGSGTGNLAETVLNHTQKKIDYLGLELDDLLIDLSASIAEVMNSK
AHFAQGDAVRPQVLKESDIIISDLPVGFYPDDSIASRYEVASPDEHTYAHHLLMEQSLKYLKPGGYAIFLAPNDLLTSAQ
APLLKKWLLAKAQFIAMITLPESIFSSSKHAKTLFVLRKQEANNIQPFIYPLRDLQDHDEMFKFRQSFQNWYKDSEIQTK
F
MNFEKIEQAYTLILENVQNIQNALATNFYDALIEQNGIYLDGDTDLQEVLTNDEKIRALHLNKEEWRRAYQFILMKAAQT
EPMQVNHQFTPDTIGFLITFLLDQLAHGEEADVLEIGSGTGNLAETVLNHTQKKIDYLGLELDDLLIDLSASIAEVMNSK
AHFAQGDAVRPQVLKESDIIISDLPVGFYPDDSIASRYEVASPDEHTYAHHLLMEQSLKYLKPGGYAIFLAPNDLLTSAQ
APLLKKWLLAKAQFIAMITLPESIFSSSKHAKTLFVLRKQEANNIQPFIYPLRDLQDHDEMFKFRQSFQNWYKDSEIQTK
F
Nucleotide
Download Length: 966 bp
>NTDB_id=1139652 DQM63_RS10525 WP_002901707.1 2112833..2113798(-) (comYH) [Streptococcus sanguinis strain NCTC7863]
ATGAATTTTGAAAAGATAGAACAAGCTTATACTCTGATTCTCGAAAACGTCCAGAATATCCAAAACGCTCTGGCGACTAA
TTTTTACGATGCTCTTATTGAGCAGAACGGCATTTACCTAGATGGAGATACTGATTTACAAGAGGTTCTGACCAACGATG
AAAAAATCCGCGCTCTGCATTTGAACAAGGAAGAGTGGCGGAGAGCTTATCAGTTTATCCTGATGAAGGCTGCCCAGACG
GAGCCCATGCAGGTCAATCATCAATTCACACCTGACACAATTGGTTTTCTGATTACTTTCTTATTGGATCAGCTGGCTCA
CGGAGAGGAAGCTGATGTATTAGAAATCGGCAGCGGAACAGGAAATTTGGCGGAGACTGTTCTCAATCATACCCAAAAGA
AGATTGACTACTTAGGTCTGGAGCTAGATGATTTATTAATTGATCTTTCTGCCAGCATTGCAGAGGTTATGAACTCTAAG
GCTCACTTTGCTCAGGGTGATGCAGTTCGGCCTCAGGTTCTGAAAGAGAGTGACATCATTATCAGTGATTTACCGGTCGG
TTTTTATCCAGACGACAGTATCGCCTCTCGCTATGAAGTGGCTAGTCCGGATGAGCACACTTATGCCCATCATCTTCTAA
TGGAGCAATCGCTCAAATATCTGAAACCGGGAGGCTATGCTATATTTCTGGCGCCGAATGACCTCTTGACCAGTGCTCAA
GCTCCCCTGCTGAAAAAATGGCTCCTAGCCAAAGCTCAGTTTATCGCGATGATAACCTTGCCAGAGTCTATTTTCTCAAG
CAGCAAGCATGCCAAAACTCTTTTTGTCTTGAGGAAGCAAGAAGCGAATAATATTCAGCCTTTTATCTATCCTCTGCGGG
ATTTGCAAGATCATGATGAAATGTTTAAATTCCGTCAAAGTTTTCAAAACTGGTATAAAGATAGTGAAATTCAAACAAAA
TTTTGA
ATGAATTTTGAAAAGATAGAACAAGCTTATACTCTGATTCTCGAAAACGTCCAGAATATCCAAAACGCTCTGGCGACTAA
TTTTTACGATGCTCTTATTGAGCAGAACGGCATTTACCTAGATGGAGATACTGATTTACAAGAGGTTCTGACCAACGATG
AAAAAATCCGCGCTCTGCATTTGAACAAGGAAGAGTGGCGGAGAGCTTATCAGTTTATCCTGATGAAGGCTGCCCAGACG
GAGCCCATGCAGGTCAATCATCAATTCACACCTGACACAATTGGTTTTCTGATTACTTTCTTATTGGATCAGCTGGCTCA
CGGAGAGGAAGCTGATGTATTAGAAATCGGCAGCGGAACAGGAAATTTGGCGGAGACTGTTCTCAATCATACCCAAAAGA
AGATTGACTACTTAGGTCTGGAGCTAGATGATTTATTAATTGATCTTTCTGCCAGCATTGCAGAGGTTATGAACTCTAAG
GCTCACTTTGCTCAGGGTGATGCAGTTCGGCCTCAGGTTCTGAAAGAGAGTGACATCATTATCAGTGATTTACCGGTCGG
TTTTTATCCAGACGACAGTATCGCCTCTCGCTATGAAGTGGCTAGTCCGGATGAGCACACTTATGCCCATCATCTTCTAA
TGGAGCAATCGCTCAAATATCTGAAACCGGGAGGCTATGCTATATTTCTGGCGCCGAATGACCTCTTGACCAGTGCTCAA
GCTCCCCTGCTGAAAAAATGGCTCCTAGCCAAAGCTCAGTTTATCGCGATGATAACCTTGCCAGAGTCTATTTTCTCAAG
CAGCAAGCATGCCAAAACTCTTTTTGTCTTGAGGAAGCAAGAAGCGAATAATATTCAGCCTTTTATCTATCCTCTGCGGG
ATTTGCAAGATCATGATGAAATGTTTAAATTCCGTCAAAGTTTTCAAAACTGGTATAAAGATAGTGAAATTCAAACAAAA
TTTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
58.73 |
98.131 |
0.576 |
| comYH | Streptococcus mutans UA140 |
58.413 |
98.131 |
0.573 |