Detailed information NTG1139147

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: DQM54_RS09545
• Genome accession: NZ_LS483375
• Coordinates: 1931854..1932291 (-)
• Length: 145 a.a.
• NCBI ID: WP_111724179.1
• Uniprot ID: -
• Organism: Streptococcus gordonii strain NCTC3165
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1926854..1937291

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM54_RS09520 (NCTC3165_01893)	folP	1927465..1928430 (-)	966	WP_111724176.1	dihydropteroate synthase	-
DQM54_RS09525 (NCTC3165_01894)	-	1928507..1929172 (-)	666	WP_111724177.1	CPBP family intramembrane glutamic endopeptidase	-
DQM54_RS09530 (NCTC3165_01895)	-	1929218..1930408 (-)	1191	WP_045634156.1	acetate kinase	-
DQM54_RS09535 (NCTC3165_01896)	comYH	1930458..1931411 (-)	954	WP_111724178.1	class I SAM-dependent methyltransferase	Machinery gene
DQM54_RS09540 (NCTC3165_01897)	comGG	1931442..1931870 (-)	429	WP_111724318.1	competence type IV pilus minor pilin ComGG	-
DQM54_RS09545 (NCTC3165_01898)	comGF/cglF	1931854..1932291 (-)	438	WP_111724179.1	competence type IV pilus minor pilin ComGF	Machinery gene
DQM54_RS09550 (NCTC3165_01899)	comGE/cglE	1932275..1932568 (-)	294	WP_111724180.1	competence type IV pilus minor pilin ComGE	Machinery gene
DQM54_RS09555 (NCTC3165_01900)	comYD	1932540..1932968 (-)	429	WP_012130939.1	competence type IV pilus minor pilin ComGD	Machinery gene
DQM54_RS09560 (NCTC3165_01901)	comYC	1932928..1933245 (-)	318	WP_012130940.1	competence type IV pilus major pilin ComGC	Machinery gene
DQM54_RS09565 (NCTC3165_01902)	comYB	1933242..1934276 (-)	1035	WP_111724181.1	competence type IV pilus assembly protein ComGB	Machinery gene
DQM54_RS09570 (NCTC3165_01903)	comYA	1934209..1935147 (-)	939	WP_111724182.1	competence type IV pilus ATPase ComGA	Machinery gene
DQM54_RS09575 (NCTC3165_01904)	-	1935250..1935618 (-)	369	WP_046164737.1	DUF1033 family protein	-

Sequence

Protein

• Length: 145 a.a.
• Molecular weight: 16634.14 Da
• Isoelectric Point: 6.8839

>NTDB_id=1139147 DQM54_RS09545 WP_111724179.1 1931854..1932291(-) (comGF/cglF) [Streptococcus gordonii strain NCTC3165]
MLKKGKLAAFTLLEALVALLVISGGLLVFQAMTKLLASEIQYQEQTKAKEWLLFADQLDAELSRSHFEKVEQNKLYVKQD
GKSIAFGKSRSDDFRKTDANGRGYQPMIYGLEAAQIHKEGQIVHLLLQFRDGLEREYIYRVEEEH

Nucleotide

• Length: 438 bp

>NTDB_id=1139147 DQM54_RS09545 WP_111724179.1 1931854..1932291(-) (comGF/cglF) [Streptococcus gordonii strain NCTC3165]
ATGTTGAAAAAAGGTAAACTAGCAGCCTTTACCCTGCTAGAAGCCTTAGTGGCCCTCTTGGTCATCAGTGGTGGCCTCTT
GGTTTTCCAGGCAATGACCAAGCTTCTAGCCAGTGAGATTCAGTATCAAGAGCAAACTAAGGCCAAGGAATGGCTCTTGT
TTGCGGACCAGTTAGATGCAGAATTATCCCGGAGCCATTTTGAAAAAGTCGAGCAAAATAAGCTTTATGTCAAACAAGAT
GGCAAGTCGATTGCATTTGGTAAGTCTAGAAGCGATGATTTTAGAAAAACAGATGCGAATGGCCGTGGTTATCAGCCCAT
GATTTATGGACTAGAAGCTGCTCAAATACATAAAGAAGGTCAGATAGTTCATTTGCTTCTGCAGTTTAGAGATGGCCTAG
AAAGAGAGTACATCTATCGTGTTGAAGAAGAACATTAG

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (38-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus mitis NCTC 12261	67.376	97.241	0.655
comGF/cglF	Streptococcus pneumoniae Rx1	66.197	97.931	0.648
comGF/cglF	Streptococcus pneumoniae D39	66.197	97.931	0.648
comGF/cglF	Streptococcus pneumoniae R6	66.197	97.931	0.648
comGF/cglF	Streptococcus pneumoniae TIGR4	66.197	97.931	0.648
comGF/cglF	Streptococcus mitis SK321	65.248	97.241	0.634
comYF	Streptococcus mutans UA140	47.183	97.931	0.462
comYF	Streptococcus mutans UA159	46.479	97.931	0.455
comGF	Lactococcus lactis subsp. cremoris KW2	42.857	96.552	0.414