Detailed information NTG1138846

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: DQM52_RS05370
• Genome accession: NZ_LS483367
• Coordinates: 1044065..1044907 (-)
• Length: 280 a.a.
• NCBI ID: WP_065355181.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain NCTC5371
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1039065..1049907

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM52_RS05355 (NCTC5371_01089)	-	1039901..1040765 (+)	865	Protein_995	IS982-like element ISSpy2 family transposase	-
DQM52_RS05360 (NCTC5371_01092)	-	1040873..1041756 (+)	884	Protein_996	LysR family transcriptional regulator	-
DQM52_RS05365 (NCTC5371_01093)	topA	1041832..1043964 (-)	2133	WP_065355180.1	type I DNA topoisomerase	-
DQM52_RS05370 (NCTC5371_01094)	dprA	1044065..1044907 (-)	843	WP_065355181.1	DNA-processing protein DprA	Machinery gene
DQM52_RS05375 (NCTC5371_01095)	-	1045013..1045783 (-)	771	WP_111681710.1	ribonuclease HII	-
DQM52_RS05380 (NCTC5371_01096)	ylqF	1045773..1046621 (-)	849	WP_111681711.1	ribosome biogenesis GTPase YlqF	-
DQM52_RS05385 (NCTC5371_01097)	-	1047343..1047573 (-)	231	WP_003062326.1	hypothetical protein	-
DQM52_RS05390 (NCTC5371_01098)	-	1047792..1048677 (-)	886	Protein_1002	helix-turn-helix domain-containing protein	-
DQM52_RS05395 (NCTC5371_01099)	-	1049016..1049456 (+)	441	WP_003060620.1	DUF1836 domain-containing protein	-

Sequence

Protein

• Length: 280 a.a.
• Molecular weight: 31300.32 Da
• Isoelectric Point: 9.2284

>NTDB_id=1138846 DQM52_RS05370 WP_065355181.1 1044065..1044907(-) (dprA) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC5371]
MNHFELYKLKKAGLTNNNILNILDYQKYQEKSLSLRDMAVVSGCKHPSHFIETYKQLDIQKLKMEFKQFPSISILDKHYP
MALKEIYNPPVLLFFQGNLDLLDKPKLAIIGSRRSSDTGVKSVRKILKELGNRFVIVSGLARGIDTSAHLACLKNGGQTI
AVIGTGLDRFYPKENQELQTFLGRKHLILTEYGPGEEALSYHFPERNRIIAGLSRGILVVEAKNRSGSLITCQIGIEEGR
DIFAVPGNILDGKSEGCLQLIKEGATCVTSGMDILSEYQK

Nucleotide

• Length: 843 bp

>NTDB_id=1138846 DQM52_RS05370 WP_065355181.1 1044065..1044907(-) (dprA) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC5371]
GTGAATCATTTTGAACTTTATAAGCTAAAGAAAGCTGGACTGACTAATAACAATATTCTCAATATTCTTGACTACCAAAA
ATATCAGGAAAAATCGTTGTCGCTTCGAGACATGGCCGTTGTTTCCGGTTGTAAGCACCCGTCTCACTTTATAGAAACCT
ATAAGCAGTTAGATATCCAAAAGTTAAAAATGGAATTTAAACAATTTCCTAGTATTTCTATCCTAGATAAACATTACCCA
ATGGCTTTGAAAGAAATATATAATCCGCCCGTCCTCTTGTTTTTTCAAGGCAATTTAGACCTTCTTGATAAACCTAAATT
AGCCATTATTGGCTCCAGGCGCTCAAGCGATACTGGAGTAAAGTCTGTCCGTAAAATTCTTAAAGAACTCGGGAACCGTT
TTGTGATTGTCAGCGGACTTGCTCGAGGTATTGACACTAGTGCACATTTAGCCTGTCTTAAAAACGGAGGACAAACCATT
GCGGTGATAGGAACAGGATTAGACCGTTTTTATCCCAAAGAAAATCAAGAATTACAAACATTCTTAGGAAGGAAACACCT
TATCTTGACAGAATACGGTCCAGGAGAAGAAGCTTTATCTTATCACTTTCCAGAACGGAATCGTATTATCGCAGGCCTTA
GCCGAGGTATTCTTGTCGTTGAAGCAAAAAATCGTTCAGGTTCCTTGATTACTTGTCAAATTGGGATAGAAGAAGGCCGA
GACATTTTTGCTGTCCCAGGAAACATTTTGGACGGGAAATCCGAAGGTTGCTTACAGCTTATAAAAGAGGGAGCAACCTG
CGTCACATCAGGGATGGACATCCTTTCTGAATATCAAAAATAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-62)

• DNA recombination-mediator protein A (DNA_processg_A) (68-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	66.187	99.286	0.657
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	59.857	99.643	0.596
dprA/cilB/dalA	Streptococcus pneumoniae D39	59.857	99.643	0.596
dprA/cilB/dalA	Streptococcus pneumoniae R6	59.857	99.643	0.596
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	59.857	99.643	0.596
dprA/cilB/dalA	Streptococcus mitis SK321	59.857	99.643	0.596
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	59.498	99.643	0.593
dprA	Lactococcus lactis subsp. cremoris KW2	56.475	99.286	0.561
dprA	Legionella pneumophila strain ERS1305867	42.5	85.714	0.364