Detailed information NTG1138615

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: DQM58_RS05935
• Genome accession: NZ_LS483363
• Coordinates: 1138872..1139714 (+)
• Length: 280 a.a.
• NCBI ID: WP_065355181.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain NCTC9414
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1133872..1144714

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM58_RS05910 (NCTC9414_01204)	-	1134323..1134763 (-)	441	WP_003060620.1	DUF1836 domain-containing protein	-
DQM58_RS05915 (NCTC9414_01205)	-	1135102..1135987 (+)	886	Protein_1089	helix-turn-helix domain-containing protein	-
DQM58_RS05920 (NCTC9414_01206)	-	1136206..1136436 (+)	231	WP_003062326.1	hypothetical protein	-
DQM58_RS05925 (NCTC9414_01207)	ylqF	1137158..1138006 (+)	849	WP_111681711.1	ribosome biogenesis GTPase YlqF	-
DQM58_RS05930 (NCTC9414_01208)	-	1137996..1138766 (+)	771	WP_111681710.1	ribonuclease HII	-
DQM58_RS05935 (NCTC9414_01209)	dprA	1138872..1139714 (+)	843	WP_065355181.1	DNA-processing protein DprA	Machinery gene
DQM58_RS05940 (NCTC9414_01210)	topA	1139815..1141947 (+)	2133	WP_111706121.1	type I DNA topoisomerase	-
DQM58_RS05945 (NCTC9414_01211)	-	1142023..1142906 (-)	884	Protein_1095	LysR family transcriptional regulator	-
DQM58_RS05950 (NCTC9414_01214)	-	1143014..1143878 (-)	865	Protein_1096	IS982-like element ISSpy2 family transposase	-

Sequence

Protein

• Length: 280 a.a.
• Molecular weight: 31300.32 Da
• Isoelectric Point: 9.2284

>NTDB_id=1138615 DQM58_RS05935 WP_065355181.1 1138872..1139714(+) (dprA) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC9414]
MNHFELYKLKKAGLTNNNILNILDYQKYQEKSLSLRDMAVVSGCKHPSHFIETYKQLDIQKLKMEFKQFPSISILDKHYP
MALKEIYNPPVLLFFQGNLDLLDKPKLAIIGSRRSSDTGVKSVRKILKELGNRFVIVSGLARGIDTSAHLACLKNGGQTI
AVIGTGLDRFYPKENQELQTFLGRKHLILTEYGPGEEALSYHFPERNRIIAGLSRGILVVEAKNRSGSLITCQIGIEEGR
DIFAVPGNILDGKSEGCLQLIKEGATCVTSGMDILSEYQK

Nucleotide

• Length: 843 bp

>NTDB_id=1138615 DQM58_RS05935 WP_065355181.1 1138872..1139714(+) (dprA) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC9414]
GTGAATCATTTTGAACTTTATAAGCTAAAGAAAGCTGGACTGACTAATAACAATATTCTCAATATTCTTGACTACCAAAA
ATATCAGGAAAAATCGTTGTCGCTTCGAGACATGGCCGTTGTTTCCGGTTGTAAGCACCCGTCTCACTTTATAGAAACCT
ATAAGCAGTTAGATATCCAAAAGTTAAAAATGGAATTTAAACAATTTCCTAGTATTTCTATCCTAGATAAACATTACCCA
ATGGCTTTGAAAGAAATATATAATCCGCCCGTCCTCTTGTTTTTTCAAGGCAATTTAGACCTTCTTGATAAACCTAAATT
AGCCATTATTGGCTCCAGGCGCTCAAGCGATACTGGAGTAAAGTCTGTCCGTAAAATTCTTAAAGAACTCGGGAACCGTT
TTGTGATTGTCAGCGGACTTGCTCGAGGTATTGACACTAGTGCACATTTAGCCTGTCTTAAAAACGGAGGACAAACCATT
GCGGTGATAGGAACAGGATTAGACCGTTTTTATCCCAAAGAAAATCAAGAATTACAAACATTCTTAGGAAGGAAACACCT
TATCTTGACAGAATACGGTCCAGGAGAAGAAGCTTTATCTTATCACTTTCCAGAACGGAATCGTATTATCGCAGGCCTTA
GCCGAGGTATTCTTGTCGTTGAAGCAAAAAATCGTTCAGGTTCCTTGATTACTTGTCAAATTGGGATAGAAGAAGGCCGA
GACATTTTTGCTGTCCCAGGAAACATTTTGGACGGGAAATCCGAAGGTTGCTTACAGCTTATAAAAGAGGGAGCAACCTG
CGTCACATCAGGGATGGACATCCTTTCTGAATATCAAAAATAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-62)

• DNA recombination-mediator protein A (DNA_processg_A) (68-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	66.187	99.286	0.657
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	59.857	99.643	0.596
dprA/cilB/dalA	Streptococcus pneumoniae D39	59.857	99.643	0.596
dprA/cilB/dalA	Streptococcus pneumoniae R6	59.857	99.643	0.596
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	59.857	99.643	0.596
dprA/cilB/dalA	Streptococcus mitis SK321	59.857	99.643	0.596
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	59.498	99.643	0.593
dprA	Lactococcus lactis subsp. cremoris KW2	56.475	99.286	0.561
dprA	Legionella pneumophila strain ERS1305867	42.5	85.714	0.364