Detailed information NTG1138182

Bioinformatically predicted

Overview

• Name: amiC
• Type: Regulator
• Locus tag: DQL13_RS08490
• Genome accession: NZ_LS483354
• Coordinates: 1780949..1782448 (-)
• Length: 499 a.a.
• NCBI ID: WP_012516281.1
• Uniprot ID: A0AAW3GJV8
• Organism: Streptococcus equi subsp. zooepidemicus strain NCTC11606
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1775949..1787448

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL13_RS08475 (NCTC11606_01696)	amiF	1778028..1778951 (-)	924	WP_012516278.1	ATP-binding cassette domain-containing protein	Regulator
DQL13_RS08480 (NCTC11606_01697)	amiE	1778944..1780014 (-)	1071	WP_012516279.1	ABC transporter ATP-binding protein	Regulator
DQL13_RS08485 (NCTC11606_01698)	amiD	1780023..1780949 (-)	927	WP_012516280.1	oligopeptide ABC transporter permease OppC	Regulator
DQL13_RS08490 (NCTC11606_01699)	amiC	1780949..1782448 (-)	1500	WP_012516281.1	ABC transporter permease	Regulator
DQL13_RS08495 (NCTC11606_01700)	amiA3	1782512..1784488 (-)	1977	WP_012516282.1	peptide ABC transporter substrate-binding protein	Regulator
DQL13_RS08500 (NCTC11606_01701)	pbp3	1784796..1786034 (+)	1239	WP_041785731.1	D-alanyl-D-alanine carboxypeptidase PBP3	-

Sequence

Protein

• Length: 499 a.a.
• Molecular weight: 55636.07 Da
• Isoelectric Point: 10.1102

>NTDB_id=1138182 DQL13_RS08490 WP_012516281.1 1780949..1782448(-) (amiC) [Streptococcus equi subsp. zooepidemicus strain NCTC11606]
MKKYIFERILRSLVSILLVTALTYTIVFTLVPKSLIFKQDPNYNKMVTTPDKKTNYLNTVFENMGYISYYSSKELQNKAS
KLDPSVTTAPTKANEKIYQKYIASIGNGWKLGRFTESKGFYAVREIPIYERVWNFFSHLVVIDHPWKIKDPKNPNLERYV
RPEIDPAVGPALVGSGTKHKYLIYFNKQFPFIHQNIVTFDLGVSYPTYANIPVVQVITQGQGRTLQKEVTFPTGKTKLSS
IDIYSRTYKTPSSLDSKDIANFGKGDAYTNTQNNYAEPSMIANSFKIGIVGVLLSYLFGLPIGMLMAYYKNGWFDRFSTA
ATTFMLALPSIALIYIVRFVGSYLGLPDTFPLLGAGDVRSYVLPALILGILGTPSTVVWFRRYIVDLQGSDFVRFARAKG
LSEFEISKNHLFKQAMVPIVNGIPQAIVGTIAGATLTETVFAFPGMGKMLIDSIKAANNSMVVGLVFIFAVLSILALLVG
DILMTILDPRIKLSGKGGK

Nucleotide

• Length: 1500 bp

>NTDB_id=1138182 DQL13_RS08490 WP_012516281.1 1780949..1782448(-) (amiC) [Streptococcus equi subsp. zooepidemicus strain NCTC11606]
ATGAAAAAATACATATTTGAACGCATATTGAGGTCGCTTGTTTCAATCCTGCTGGTAACCGCACTAACCTATACTATTGT
CTTTACCTTAGTGCCAAAAAGCTTGATTTTTAAGCAAGACCCTAATTACAATAAGATGGTGACAACACCTGATAAGAAAA
CCAATTATCTAAATACTGTTTTTGAAAATATGGGCTATATTTCCTATTACAGCAGTAAAGAACTACAGAATAAGGCTTCA
AAGCTTGATCCTTCTGTAACAACTGCACCAACCAAGGCCAATGAAAAAATATATCAAAAATATATTGCTTCTATCGGTAA
TGGTTGGAAGCTTGGGCGCTTTACAGAAAGTAAGGGATTTTATGCGGTTAGAGAGATTCCAATCTATGAGCGCGTGTGGA
ATTTCTTTAGCCATTTGGTTGTGATTGATCACCCATGGAAAATCAAGGATCCAAAAAATCCAAATCTAGAGCGTTATGTG
CGACCAGAAATTGACCCTGCTGTTGGTCCAGCCTTAGTTGGCTCTGGTACTAAGCACAAATACTTGATTTACTTCAACAA
GCAATTTCCATTTATCCATCAAAATATCGTAACCTTTGATTTGGGAGTGTCCTATCCAACCTATGCCAATATTCCAGTTG
TTCAGGTTATCACTCAAGGACAAGGAAGAACACTTCAAAAAGAGGTCACCTTCCCAACAGGCAAAACAAAGCTGTCTTCA
ATTGATATTTACTCTCGAACCTATAAAACACCAAGTTCTTTAGATAGCAAGGATATTGCCAATTTTGGTAAGGGTGATGC
TTATACCAATACACAAAATAACTATGCAGAGCCATCTATGATTGCAAATTCCTTTAAGATTGGTATTGTCGGTGTCTTGT
TGTCCTATCTTTTTGGTTTGCCAATTGGTATGCTGATGGCTTATTATAAGAATGGCTGGTTTGACCGCTTTTCAACGGCT
GCCACAACCTTTATGTTAGCCCTGCCCAGCATTGCGCTTATCTATATTGTTCGATTTGTCGGTTCTTATTTGGGCTTGCC
AGATACCTTTCCGCTGCTAGGAGCAGGAGATGTTAGGTCTTATGTGCTGCCTGCTCTTATATTAGGAATTCTTGGTACAC
CAAGTACAGTAGTTTGGTTCCGACGCTATATTGTGGACTTGCAAGGCAGTGATTTTGTTCGCTTTGCACGAGCAAAGGGG
CTTTCAGAATTTGAGATTTCAAAAAATCATCTCTTTAAGCAGGCTATGGTGCCTATTGTTAACGGTATTCCACAAGCCAT
TGTCGGAACAATTGCCGGTGCAACCTTGACAGAGACTGTCTTTGCTTTCCCAGGAATGGGTAAAATGCTGATTGATTCCA
TAAAAGCTGCTAATAACTCTATGGTTGTTGGTCTTGTCTTTATTTTTGCTGTTTTATCAATATTAGCCTTGCTAGTAGGT
GATATTCTTATGACAATTTTAGATCCACGTATTAAATTATCGGGTAAAGGAGGTAAGTAA

Domains

Predicted by InterproScan.

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (299-492)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiC	Streptococcus salivarius strain HSISS4	62.525	100	0.625
amiC	Streptococcus thermophilus LMG 18311	62.525	100	0.625
amiC	Streptococcus thermophilus LMD-9	62.325	100	0.623