Detailed information NTG1138180

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: DQL13_RS08480
• Genome accession: NZ_LS483354
• Coordinates: 1778944..1780014 (-)
• Length: 356 a.a.
• NCBI ID: WP_012516279.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. zooepidemicus strain NCTC11606
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1773944..1785014

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL13_RS08475 (NCTC11606_01696)	amiF	1778028..1778951 (-)	924	WP_012516278.1	ATP-binding cassette domain-containing protein	Regulator
DQL13_RS08480 (NCTC11606_01697)	amiE	1778944..1780014 (-)	1071	WP_012516279.1	ABC transporter ATP-binding protein	Regulator
DQL13_RS08485 (NCTC11606_01698)	amiD	1780023..1780949 (-)	927	WP_012516280.1	oligopeptide ABC transporter permease OppC	Regulator
DQL13_RS08490 (NCTC11606_01699)	amiC	1780949..1782448 (-)	1500	WP_012516281.1	ABC transporter permease	Regulator
DQL13_RS08495 (NCTC11606_01700)	amiA3	1782512..1784488 (-)	1977	WP_012516282.1	peptide ABC transporter substrate-binding protein	Regulator

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 39734.86 Da
• Isoelectric Point: 6.1118

>NTDB_id=1138180 DQL13_RS08480 WP_012516279.1 1778944..1780014(-) (amiE) [Streptococcus equi subsp. zooepidemicus strain NCTC11606]
MTEKQEIILSAKNIVVEFDVRDRVLTAIRDVSLDLYKGEVLAVVGESGSGKSVLTKTFTGMLEANGRVASGTITYAGQEL
TELKNHKDWEAIRGSKIATIFQDPMTSLDPIQTIGSQITEVIVKHQKKSRSEAKALAIDYMTRVGIPEPEKRFGEYPFQY
SGGMRQRIVIAIALACKPDILICDEPTTALDVTIQAQIIDLLKTLQKEYHFTIIFITHDLGVVASIADKVAVMYAGEIIE
YGKVEEIFYDPRHPYTWSLLSSLPQLADEKGVLFSIPGTPPSLYKPIVGDAFAPRSQYAMAIDFEETVPRFTISDTHWAK
TWLLHPDAPKVQKPAVIQDLHQKILKKMSRQEEGNV

Nucleotide

• Length: 1071 bp

>NTDB_id=1138180 DQL13_RS08480 WP_012516279.1 1778944..1780014(-) (amiE) [Streptococcus equi subsp. zooepidemicus strain NCTC11606]
ATGACTGAAAAACAAGAAATTATATTAAGTGCTAAAAATATTGTTGTAGAGTTTGATGTGCGTGATCGTGTACTGACCGC
TATTCGCGATGTTTCTCTTGATTTGTACAAGGGAGAGGTATTGGCTGTTGTTGGTGAGTCAGGCTCTGGCAAGTCTGTTT
TAACTAAGACATTTACAGGAATGCTGGAGGCAAATGGACGTGTTGCTTCAGGGACGATAACCTATGCGGGTCAAGAACTA
ACAGAGCTTAAAAATCATAAGGACTGGGAAGCTATTCGCGGCTCTAAAATTGCTACTATTTTCCAGGATCCAATGACTAG
TCTAGATCCGATTCAAACGATTGGCAGCCAGATTACTGAGGTTATTGTTAAGCATCAGAAAAAATCTAGATCAGAGGCTA
AGGCTTTAGCGATCGATTATATGACAAGAGTCGGTATTCCTGAGCCGGAAAAGCGCTTTGGAGAGTATCCTTTCCAATAT
TCTGGTGGTATGAGACAGCGTATCGTTATTGCCATTGCCCTAGCCTGTAAGCCAGATATTCTTATCTGTGATGAGCCGAC
AACAGCTCTTGACGTTACCATTCAGGCTCAGATTATTGACCTGTTAAAGACACTTCAAAAAGAGTATCACTTCACCATTA
TCTTTATCACGCATGACCTAGGAGTGGTTGCAAGTATTGCTGACAAGGTTGCTGTTATGTACGCAGGGGAGATTATCGAG
TATGGGAAGGTTGAAGAAATCTTCTATGATCCTCGTCACCCCTACACATGGAGCTTATTATCTAGCCTACCGCAATTGGC
AGATGAAAAGGGCGTTCTGTTTTCAATTCCAGGGACACCTCCGTCCCTATACAAGCCAATTGTTGGGGATGCCTTTGCGC
CACGCTCTCAGTATGCTATGGCCATTGATTTTGAAGAAACAGTTCCTCGTTTTACGATCAGTGACACGCATTGGGCAAAA
ACCTGGCTCCTACACCCAGATGCTCCTAAGGTTCAAAAACCAGCTGTTATTCAGGATTTACACCAAAAAATATTGAAAAA
AATGTCACGCCAGGAGGAAGGAAATGTCTGA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (29-187)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (239-301)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	80	100	0.809
amiE	Streptococcus thermophilus LMG 18311	78.889	100	0.798
amiE	Streptococcus thermophilus LMD-9	78.889	100	0.798
oppD	Streptococcus mutans UA159	56.456	93.539	0.528