Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   DQL35_RS10545 Genome accession   NZ_LS483325
Coordinates   2169839..2171062 (+) Length   407 a.a.
NCBI ID   WP_111678804.1    Uniprot ID   A0A380JVF3
Organism   Streptococcus equi subsp. zooepidemicus strain NCTC7022     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2164839..2176062
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL35_RS10520 (NCTC7022_02125) - 2165534..2168119 (+) 2586 WP_111678803.1 YfhO family protein -
  DQL35_RS10540 (NCTC7022_02129) rlmH 2169150..2169629 (-) 480 WP_037579263.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  DQL35_RS10545 (NCTC7022_02130) htrA 2169839..2171062 (+) 1224 WP_111678804.1 S1C family serine protease Regulator
  DQL35_RS10550 (NCTC7022_02131) spo0J 2171181..2171954 (+) 774 WP_111678805.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 407 a.a.        Molecular weight: 42508.13 Da        Isoelectric Point: 5.8380

>NTDB_id=1136602 DQL35_RS10545 WP_111678804.1 2169839..2171062(+) (htrA) [Streptococcus equi subsp. zooepidemicus strain NCTC7022]
MLKSKNILKPLWVLVIGFLGGLLAALVVNGFSQNSLTSSNAKGATTTSNVSFNNTTDTTKAVKVVQDAVVSVINYQKAAS
PTISNPYINLFGEENDTSAVQKEDELSIHSEGSGVVYKKEGNTAYLVTNNHVIEGAQRIEILTADGSKIVGELVGADTYS
DLAVVKIAADKIKTIAKFADSTKINVGEVAIAIGSPLGTKYANSVTEGIVSSLSRTVTSRNEAGETISTNAIQTDAAINP
GNSGGPLINIEGQVIGINSSKISSTPTGSGGAIEGIGFAIPSSDVVTIINQLESNGAVIRPALGITMVNLSNLSTSALIQ
LNIPTSVTSGVVVASTQNSMPALGKLEQYDVITEVDGKEVSSISDLQSVLYSHEINDTIKVTFYRGTAKKKVDIKLTKTT
KDLTKKQ

Nucleotide


Download         Length: 1224 bp        

>NTDB_id=1136602 DQL35_RS10545 WP_111678804.1 2169839..2171062(+) (htrA) [Streptococcus equi subsp. zooepidemicus strain NCTC7022]
GTGTTAAAATCAAAAAATATATTGAAGCCCTTATGGGTTTTAGTCATTGGATTTTTAGGGGGCTTATTAGCTGCCTTAGT
TGTTAACGGATTTAGTCAGAATTCTCTAACATCTTCAAATGCAAAGGGAGCAACGACAACAAGCAACGTCAGCTTTAACA
ATACAACTGATACAACAAAAGCTGTTAAGGTGGTTCAAGATGCTGTAGTGTCTGTTATTAACTATCAAAAGGCTGCTTCG
CCTACTATTTCAAATCCTTACATCAATCTTTTTGGAGAAGAAAATGACACCTCAGCGGTACAAAAAGAGGACGAGCTAAG
CATACACAGTGAAGGCTCCGGTGTTGTTTACAAAAAAGAAGGAAATACCGCTTATCTTGTAACCAACAATCATGTTATTG
AGGGAGCTCAACGAATTGAAATTTTAACAGCAGATGGCTCTAAGATCGTTGGAGAACTAGTTGGTGCAGACACTTATTCT
GACCTAGCTGTTGTCAAAATTGCTGCTGATAAAATCAAAACAATAGCCAAATTTGCAGATTCAACCAAAATCAATGTTGG
AGAGGTAGCCATTGCAATTGGTAGTCCTCTTGGAACCAAATACGCCAACTCAGTGACAGAAGGGATTGTTTCGAGTCTAA
GCCGTACAGTCACTTCAAGAAATGAGGCAGGTGAGACTATCTCAACAAATGCTATCCAAACTGATGCTGCTATCAATCCA
GGTAATTCAGGTGGACCACTCATCAATATTGAAGGTCAGGTCATTGGTATCAACTCAAGTAAAATATCCTCAACACCTAC
TGGCAGCGGCGGAGCCATTGAAGGGATTGGCTTTGCTATTCCATCAAGCGATGTTGTCACCATTATTAACCAACTAGAAT
CTAACGGAGCTGTTATCAGACCAGCCTTAGGCATTACTATGGTAAATCTAAGCAATCTATCAACCAGTGCATTGATTCAA
TTGAACATTCCAACAAGCGTTACCAGTGGTGTTGTCGTAGCTTCTACTCAAAATAGCATGCCAGCTCTTGGCAAATTGGA
GCAGTATGATGTCATTACTGAGGTTGACGGTAAAGAGGTTAGCTCAATCAGTGACCTACAAAGTGTCCTATACAGTCATG
AGATTAACGACACCATTAAGGTAACCTTCTACAGAGGAACTGCTAAGAAAAAAGTTGACATCAAATTAACAAAAACAACT
AAGGATCTAACTAAAAAGCAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A380JVF3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

61.52

100

0.617

  htrA Streptococcus gordonii str. Challis substr. CH1

57.855

98.526

0.57

  htrA Streptococcus mitis NCTC 12261

55.416

97.543

0.541

  htrA Streptococcus pneumoniae Rx1

54.386

98.034

0.533

  htrA Streptococcus pneumoniae D39

54.386

98.034

0.533

  htrA Streptococcus pneumoniae R6

54.386

98.034

0.533

  htrA Streptococcus pneumoniae TIGR4

54.386

98.034

0.533


Multiple sequence alignment