Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   DQL35_RS10550 Genome accession   NZ_LS483325
Coordinates   2171181..2171954 (+) Length   257 a.a.
NCBI ID   WP_111678805.1    Uniprot ID   A0A380JUT2
Organism   Streptococcus equi subsp. zooepidemicus strain NCTC7022     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2166181..2176954
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL35_RS10540 (NCTC7022_02129) rlmH 2169150..2169629 (-) 480 WP_037579263.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  DQL35_RS10545 (NCTC7022_02130) htrA 2169839..2171062 (+) 1224 WP_111678804.1 S1C family serine protease Regulator
  DQL35_RS10550 (NCTC7022_02131) spo0J 2171181..2171954 (+) 774 WP_111678805.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 257 a.a.        Molecular weight: 29142.84 Da        Isoelectric Point: 9.8548

>NTDB_id=1136603 DQL35_RS10550 WP_111678805.1 2171181..2171954(+) (spo0J) [Streptococcus equi subsp. zooepidemicus strain NCTC7022]
MTEILMHIPIEDIVANPYQPRLQFNQKELEELAHSIQANGLIQPIIVRKSDVFGYELVAGERRFKAAKLAGLQKIPAIIK
EMSTLESMQQAIVENLQRSNLNAIEEAKAYQLLIDKNKMTHEDIAAYMGKSRPYISNTIRLLQLPDVIKQAIEDGTISAG
HARALLSLSTPKEQELYFHNILDQGLSVRQIEQLVKAKHYPQKRSKHKTIFVKSLEKELSKSLGLPVALSLKKNDSGQLQ
LSFSNQEELNRIINKLK

Nucleotide


Download         Length: 774 bp        

>NTDB_id=1136603 DQL35_RS10550 WP_111678805.1 2171181..2171954(+) (spo0J) [Streptococcus equi subsp. zooepidemicus strain NCTC7022]
ATGACAGAAATCCTAATGCACATTCCTATCGAGGATATTGTGGCAAATCCCTATCAACCGCGTCTTCAATTTAATCAAAA
AGAGCTTGAGGAGCTGGCACATTCCATTCAGGCTAATGGCTTGATTCAACCAATCATTGTCAGAAAGTCTGATGTTTTTG
GTTATGAATTAGTCGCTGGAGAGCGGCGCTTCAAAGCAGCCAAGCTGGCAGGGCTTCAAAAGATTCCAGCAATTATCAAG
GAGATGTCTACTCTTGAGAGCATGCAGCAGGCCATTGTAGAAAACCTACAGCGCTCGAATTTAAATGCTATTGAAGAGGC
TAAGGCCTATCAATTACTCATTGATAAAAATAAGATGACCCATGAGGACATCGCAGCATACATGGGAAAATCACGTCCTT
ATATCAGCAACACCATCAGGCTGCTGCAACTACCAGACGTTATTAAACAAGCGATTGAGGACGGTACCATTAGTGCTGGA
CATGCAAGAGCCTTATTATCCTTGTCAACACCAAAAGAGCAGGAGCTTTATTTTCACAACATTCTGGATCAAGGCTTAAG
CGTTAGGCAAATCGAACAGCTGGTAAAAGCTAAGCATTATCCCCAAAAAAGAAGCAAGCATAAAACCATTTTTGTGAAAT
CTTTAGAAAAAGAGCTCTCAAAATCATTAGGACTACCTGTGGCATTGTCTCTCAAAAAAAATGACAGTGGGCAGCTGCAG
CTATCATTTTCAAACCAAGAAGAATTGAACAGAATTATCAACAAGCTAAAGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A380JUT2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

62.109

99.611

0.619


Multiple sequence alignment