Detailed information NTG1135987

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: DQL89_RS08350
• Genome accession: NZ_LS483313
• Coordinates: 1769817..1770707 (-)
• Length: 296 a.a.
• NCBI ID: WP_103363870.1
• Uniprot ID: -
• Organism: Staphylococcus simulans strain NCTC11046
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1764817..1775707

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL89_RS08335 (NCTC11046_01711)	xerC	1765205..1766095 (-)	891	WP_002480690.1	tyrosine recombinase XerC	-
DQL89_RS08340 (NCTC11046_01712)	trmFO	1766217..1767524 (-)	1308	WP_002480689.1	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	-
DQL89_RS08345 (NCTC11046_01713)	topA	1767608..1769674 (-)	2067	WP_023015697.1	type I DNA topoisomerase	-
DQL89_RS08350 (NCTC11046_01714)	dprA	1769817..1770707 (-)	891	WP_103363870.1	DNA-processing protein DprA	Machinery gene
DQL89_RS08355 (NCTC11046_01715)	sucD	1770928..1771842 (-)	915	WP_023015699.1	succinate--CoA ligase subunit alpha	-
DQL89_RS08360 (NCTC11046_01716)	sucC	1771863..1773029 (-)	1167	WP_002480685.1	ADP-forming succinate--CoA ligase subunit beta	-
DQL89_RS08365	-	1773259..1774029 (-)	771	Protein_1622	ribonuclease HII	-
DQL89_RS08370 (NCTC11046_01719)	ylqF	1774029..1774898 (-)	870	WP_103363869.1	ribosome biogenesis GTPase YlqF	-

Sequence

Protein

• Length: 296 a.a.
• Molecular weight: 34072.20 Da
• Isoelectric Point: 8.9937

>NTDB_id=1135987 DQL89_RS08350 WP_103363870.1 1769817..1770707(-) (dprA) [Staphylococcus simulans strain NCTC11046]
MNLKELDLELLKLRYAGYSTKQIYALLFRYPDYFELNLPERMTKLRQFSQNTASKTMLLHYQTYCQIEPNDIYQSLVSRN
IYLISIFNPDYPHLLKHIYAPPLLLFCKGNRTCLKTPHYLSVVGSREATKYTQNALEYLFKNEALHELVIVSGLAKGGDA
FAHEAALHYNMATIGVLAFGHYHHYPKETRALRKRIEQTGLTLSEYIPTDRPARYKFPERNRIISGLSQGVLITESRERS
GAQITVDLALEQDRNVYVLPGSLFQKLTIGNLKRAQEGAKIVLSAQDIMEDYETLN

Nucleotide

• Length: 891 bp

>NTDB_id=1135987 DQL89_RS08350 WP_103363870.1 1769817..1770707(-) (dprA) [Staphylococcus simulans strain NCTC11046]
TTGAACCTCAAAGAATTAGATTTAGAACTCCTCAAATTACGCTACGCAGGTTACTCCACAAAGCAAATATACGCACTTTT
ATTCAGGTATCCAGACTATTTTGAACTAAATTTACCAGAAAGAATGACAAAACTTCGACAATTTTCACAAAATACTGCCT
CTAAAACTATGCTTCTGCATTATCAAACATATTGTCAGATAGAGCCTAATGATATTTATCAATCTTTGGTCTCTCGAAAC
ATCTACTTAATTTCCATTTTTAATCCTGATTATCCTCACTTGCTTAAACACATTTATGCACCTCCATTATTATTATTTTG
TAAAGGCAATAGAACTTGCTTAAAAACACCTCACTATTTAAGTGTCGTCGGTTCTAGAGAAGCGACAAAGTATACACAAA
ATGCATTAGAATACCTCTTTAAGAATGAAGCATTACATGAACTCGTTATCGTTTCAGGTTTGGCTAAAGGCGGAGATGCA
TTTGCACATGAAGCGGCTTTACACTATAATATGGCAACGATTGGCGTTTTAGCATTTGGTCATTATCATCATTATCCTAA
AGAAACGCGTGCATTACGAAAACGAATAGAACAAACAGGTTTAACCCTCTCAGAATATATCCCCACAGATAGACCTGCCA
GATATAAATTTCCGGAACGTAATCGTATCATTAGCGGTTTATCGCAAGGCGTACTGATTACTGAGTCTAGAGAAAGAAGC
GGCGCACAAATCACAGTAGATTTAGCTTTAGAACAAGACAGAAATGTTTATGTGTTGCCAGGCAGCTTATTTCAAAAATT
GACCATTGGAAATTTAAAACGCGCACAAGAAGGCGCGAAAATCGTTTTGAGTGCGCAAGATATTATGGAAGATTATGAAA
CATTAAATTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (79-283)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Staphylococcus aureus N315	51.916	96.959	0.503
dprA	Staphylococcus aureus MW2	51.916	96.959	0.503
dprA	Legionella pneumophila strain ERS1305867	37.966	99.662	0.378
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	37.801	98.311	0.372
dprA/cilB/dalA	Streptococcus pneumoniae D39	37.801	98.311	0.372
dprA/cilB/dalA	Streptococcus pneumoniae R6	37.801	98.311	0.372
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	37.801	98.311	0.372
dprA/cilB/dalA	Streptococcus mitis SK321	37.457	98.311	0.368
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	37.113	98.311	0.365