Detailed information NTG1131152

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: H0513_RS04865
• Genome accession: NZ_LR822023
• Coordinates: 905996..906835 (+)
• Length: 279 a.a.
• NCBI ID: WP_100262427.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus isolate STH_CIRM_368
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 900996..911835

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H0513_RS04835 (STHERMO_1058)	-	901413..901940 (+)	528	WP_179972924.1	ECF transporter S component	-
H0513_RS04840 (STHERMO_1059)	-	901964..902479 (+)	516	WP_179972925.1	transcription repressor NadR	-
H0513_RS04845 (STHERMO_1060)	-	902574..903263 (+)	690	WP_046206437.1	XRE family transcriptional regulator	-
H0513_RS04850 (STHERMO_1061)	ylqF	903391..904245 (+)	855	WP_002950602.1	ribosome biogenesis GTPase YlqF	-
H0513_RS04855 (STHERMO_1062)	-	904232..904999 (+)	768	WP_100262429.1	ribonuclease HII	-
H0513_RS04860 (STHERMO_1063)	-	905010..905930 (+)	921	WP_100262428.1	ROK family protein	-
H0513_RS04865 (STHERMO_1064)	dprA	905996..906835 (+)	840	WP_100262427.1	DNA-processing protein DprA	Machinery gene
H0513_RS04870 (STHERMO_1066)	topA	907003..909147 (+)	2145	WP_179972926.1	type I DNA topoisomerase	-
H0513_RS04875 (STHERMO_1067)	-	909264..910088 (+)	825	WP_179972927.1	TraX family protein	-
H0513_RS04880 (STHERMO_1068)	-	910124..910783 (+)	660	WP_179972928.1	response regulator transcription factor	-

Sequence

Protein

• Length: 279 a.a.
• Molecular weight: 31257.21 Da
• Isoelectric Point: 8.6557

>NTDB_id=1131152 H0513_RS04865 WP_100262427.1 905996..906835(+) (dprA) [Streptococcus thermophilus isolate STH_CIRM_368]
MNNFELFKLKAAGLTNLNILNILDYQKNQDKKLSLRDMAVVSKSKNAVLFMEKYKNLDVKQLKEDFQRFPTLSIFDKEYP
IELKHSYNPPVLLFYQGNIDLLSKPKLAVVGARKCSETGKQSVRKIVHELGNAFTIVSGLARGIDTCAHMEAIKNKGNTI
AVIGTGLDVYYPKENKALQDYMAKNHLVLTEYGPGEQPLKYHFPERNRIISGLCQGVMVVEAKIRSGSLITCERAMEEGR
DVFAIPGNILDGKSDGCHYLIQEGAKCITTGFDIISEFS

Nucleotide

• Length: 840 bp

>NTDB_id=1131152 H0513_RS04865 WP_100262427.1 905996..906835(+) (dprA) [Streptococcus thermophilus isolate STH_CIRM_368]
ATGAATAACTTTGAACTTTTTAAACTAAAAGCTGCTGGATTGACGAATTTAAACATCCTTAACATTTTAGACTATCAAAA
AAATCAAGATAAAAAATTGAGCTTACGTGATATGGCAGTGGTATCTAAGTCTAAAAATGCCGTTCTCTTTATGGAAAAAT
ACAAGAATTTAGATGTTAAGCAGCTTAAGGAAGATTTTCAACGTTTTCCGACCTTATCAATTTTTGATAAGGAGTATCCC
ATTGAGCTGAAACATTCCTATAATCCTCCTGTCCTCCTCTTTTATCAAGGGAATATTGATTTGCTAAGTAAACCCAAGTT
AGCAGTAGTTGGTGCCAGAAAGTGTTCTGAAACAGGAAAACAGTCTGTTCGAAAAATTGTTCATGAACTTGGGAACGCCT
TTACTATTGTAAGTGGCTTGGCGCGTGGAATTGATACTTGTGCTCACATGGAGGCCATAAAAAATAAAGGTAACACCATT
GCAGTTATCGGGACTGGGCTAGACGTATATTATCCTAAAGAAAACAAAGCTTTACAGGACTATATGGCTAAAAATCATTT
AGTTCTTACAGAATACGGACCGGGTGAACAGCCACTTAAATACCATTTTCCTGAACGAAATCGGATAATTTCTGGATTGT
GTCAAGGAGTTATGGTGGTTGAAGCTAAGATTCGCTCGGGAAGTCTTATTACTTGTGAGCGTGCAATGGAAGAAGGGAGA
GATGTTTTCGCCATACCAGGAAATATTTTAGATGGAAAATCGGATGGATGCCATTACCTCATTCAAGAGGGCGCAAAGTG
CATTACTACAGGATTTGACATCATTTCAGAGTTTTCATGA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-62)

• DNA recombination-mediator protein A (DNA_processg_A) (71-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	72.043	100	0.72
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	62.95	99.642	0.627
dprA/cilB/dalA	Streptococcus pneumoniae D39	62.95	99.642	0.627
dprA/cilB/dalA	Streptococcus pneumoniae R6	62.95	99.642	0.627
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	62.95	99.642	0.627
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	62.59	99.642	0.624
dprA/cilB/dalA	Streptococcus mitis SK321	62.59	99.642	0.624
dprA	Lactococcus lactis subsp. cremoris KW2	60.432	99.642	0.602
dprA	Bacillus subtilis subsp. subtilis str. 168	49.048	75.269	0.369
dprA	Latilactobacillus sakei subsp. sakei 23K	39.768	92.832	0.369