Detailed information
Bioinformatically predicted
Overview
| Name | comR | Type | Regulator |
| Locus tag | H0502_RS06865 | Genome accession | NZ_LR822013 |
| Coordinates | 1367011..1367910 (-) | Length | 299 a.a. |
| NCBI ID | WP_014607953.1 | Uniprot ID | A0AAN1ZWJ0 |
| Organism | Streptococcus thermophilus isolate STH_CIRM_32 | ||
| Function | activate transcription of comX; activate transcription of comS (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1362011..1372910
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H0502_RS06845 (STHERMO_1568) | - | 1362012..1362527 (-) | 516 | WP_002949547.1 | AmiS/UreI family transporter | - |
| H0502_RS10090 (STHERMO_1569) | - | 1363028..1363828 (+) | 801 | WP_232086444.1 | urease cluster protein | - |
| H0502_RS10450 | - | 1363753..1364100 (+) | 348 | WP_232085744.1 | DUF4153 domain-containing protein | - |
| H0502_RS06855 (STHERMO_1572) | - | 1364316..1364633 (-) | 318 | WP_179970762.1 | DUF805 domain-containing protein | - |
| H0502_RS10585 (STHERMO_1573) | comA | 1364741..1365574 (-) | 834 | WP_269149495.1 | ATP-binding cassette domain-containing protein | Regulator |
| H0502_RS10590 | - | 1365596..1366312 (-) | 717 | Protein_1367 | ABC transporter transmembrane domain-containing protein | - |
| H0502_RS10595 | - | 1366342..1366836 (-) | 495 | Protein_1368 | cysteine peptidase family C39 domain-containing protein | - |
| H0502_RS06865 (STHERMO_1578) | comR | 1367011..1367910 (-) | 900 | WP_014607953.1 | helix-turn-helix domain-containing protein | Regulator |
| H0502_RS06870 (STHERMO_1579) | - | 1368105..1368755 (-) | 651 | WP_011225447.1 | phosphatase PAP2 family protein | - |
| H0502_RS06875 (STHERMO_1580) | - | 1368758..1369315 (-) | 558 | WP_002949523.1 | ECF transporter S component | - |
| H0502_RS06880 (STHERMO_1581) | - | 1369627..1370136 (-) | 510 | WP_014607952.1 | tRNA (cytidine(34)-2'-O)-methyltransferase | - |
| H0502_RS06885 (STHERMO_1582) | trkA | 1370425..1371774 (+) | 1350 | WP_014607951.1 | Trk system potassium transporter TrkA | - |
Sequence
Protein
Download Length: 299 a.a. Molecular weight: 35289.70 Da Isoelectric Point: 5.0061
>NTDB_id=1130799 H0502_RS06865 WP_014607953.1 1367011..1367910(-) (comR) [Streptococcus thermophilus isolate STH_CIRM_32]
MNIKDSIGLRIKTERERQQMSREVLCLDGAELTVRQLIRIEKGESLPSLDRLSYIAKRLGKSMTELLDQDNITIPDEYYE
MKNRLIKFPTYRNPDRIKSKLTLIEEVYEKFFDILPEEELLTLDILENILSFTSWEESPKVEEIYEDLFEQVKRKRKFST
NDLLVIDYYFFHLYGRKQYDKKLFERIIKRVLNQEIWTDDVYNIVLFNDLMAIAALKIFHNSFSDFLTVVDKALAVIENS
QLYSYKPSVFVLKAKYELLHKENKKEAAENYDKAIMFASVLEDSVLEESIKAGKLADGL
MNIKDSIGLRIKTERERQQMSREVLCLDGAELTVRQLIRIEKGESLPSLDRLSYIAKRLGKSMTELLDQDNITIPDEYYE
MKNRLIKFPTYRNPDRIKSKLTLIEEVYEKFFDILPEEELLTLDILENILSFTSWEESPKVEEIYEDLFEQVKRKRKFST
NDLLVIDYYFFHLYGRKQYDKKLFERIIKRVLNQEIWTDDVYNIVLFNDLMAIAALKIFHNSFSDFLTVVDKALAVIENS
QLYSYKPSVFVLKAKYELLHKENKKEAAENYDKAIMFASVLEDSVLEESIKAGKLADGL
Nucleotide
Download Length: 900 bp
>NTDB_id=1130799 H0502_RS06865 WP_014607953.1 1367011..1367910(-) (comR) [Streptococcus thermophilus isolate STH_CIRM_32]
TTGAACATAAAAGACAGCATTGGACTAAGAATCAAAACTGAGCGTGAACGCCAACAGATGTCACGTGAAGTGCTATGTTT
AGATGGTGCGGAATTGACTGTTCGCCAGTTAATTCGTATTGAAAAGGGGGAGTCTCTCCCGTCTTTAGATAGATTATCGT
ATATTGCTAAACGTTTAGGAAAAAGTATGACAGAGTTATTGGATCAAGACAATATTACCATTCCTGACGAATATTATGAA
ATGAAGAATCGTTTGATTAAGTTTCCAACGTACAGAAACCCTGACAGAATAAAGTCTAAACTTACTTTGATTGAGGAAGT
CTATGAGAAATTTTTTGATATTCTTCCAGAAGAAGAATTATTAACTCTAGACATTCTCGAAAATATATTGAGTTTTACTA
GCTGGGAGGAGAGTCCAAAAGTTGAGGAGATATATGAAGACTTGTTTGAACAAGTCAAAAGGAAGAGGAAATTCTCAACT
AACGATTTATTAGTCATTGACTATTATTTCTTTCATCTTTATGGGAGAAAACAGTATGACAAAAAACTATTTGAAAGAAT
TATAAAGAGAGTATTAAATCAGGAAATTTGGACAGATGATGTTTACAATATTGTTTTATTTAATGATTTGATGGCTATTG
CTGCTTTAAAGATTTTTCACAATTCCTTCTCAGACTTCTTAACAGTTGTGGATAAAGCCTTAGCTGTCATAGAAAACTCA
CAATTATATAGCTACAAGCCTAGTGTTTTTGTACTTAAGGCTAAATATGAACTTCTGCATAAAGAAAACAAGAAAGAGGC
TGCAGAGAATTATGATAAGGCCATAATGTTTGCTTCCGTTTTGGAAGACTCGGTTTTAGAGGAAAGTATAAAGGCAGGAA
AATTGGCAGATGGTTTATAG
TTGAACATAAAAGACAGCATTGGACTAAGAATCAAAACTGAGCGTGAACGCCAACAGATGTCACGTGAAGTGCTATGTTT
AGATGGTGCGGAATTGACTGTTCGCCAGTTAATTCGTATTGAAAAGGGGGAGTCTCTCCCGTCTTTAGATAGATTATCGT
ATATTGCTAAACGTTTAGGAAAAAGTATGACAGAGTTATTGGATCAAGACAATATTACCATTCCTGACGAATATTATGAA
ATGAAGAATCGTTTGATTAAGTTTCCAACGTACAGAAACCCTGACAGAATAAAGTCTAAACTTACTTTGATTGAGGAAGT
CTATGAGAAATTTTTTGATATTCTTCCAGAAGAAGAATTATTAACTCTAGACATTCTCGAAAATATATTGAGTTTTACTA
GCTGGGAGGAGAGTCCAAAAGTTGAGGAGATATATGAAGACTTGTTTGAACAAGTCAAAAGGAAGAGGAAATTCTCAACT
AACGATTTATTAGTCATTGACTATTATTTCTTTCATCTTTATGGGAGAAAACAGTATGACAAAAAACTATTTGAAAGAAT
TATAAAGAGAGTATTAAATCAGGAAATTTGGACAGATGATGTTTACAATATTGTTTTATTTAATGATTTGATGGCTATTG
CTGCTTTAAAGATTTTTCACAATTCCTTCTCAGACTTCTTAACAGTTGTGGATAAAGCCTTAGCTGTCATAGAAAACTCA
CAATTATATAGCTACAAGCCTAGTGTTTTTGTACTTAAGGCTAAATATGAACTTCTGCATAAAGAAAACAAGAAAGAGGC
TGCAGAGAATTATGATAAGGCCATAATGTTTGCTTCCGTTTTGGAAGACTCGGTTTTAGAGGAAAGTATAAAGGCAGGAA
AATTGGCAGATGGTTTATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comR | Streptococcus thermophilus LMG 18311 |
99.666 |
100 |
0.997 |
| comR | Streptococcus thermophilus LMD-9 |
98.997 |
100 |
0.99 |
| comR | Streptococcus salivarius strain HSISS4 |
94.983 |
100 |
0.95 |
| comR | Streptococcus salivarius SK126 |
94.314 |
100 |
0.943 |
| comR/comR2 | Streptococcus sobrinus strain NIDR 6715-7 |
42.14 |
100 |
0.421 |
| comR/comR1 | Streptococcus sobrinus strain NIDR 6715-7 |
41.806 |
100 |
0.418 |