Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   FQT45_RS10405 Genome accession   NZ_LR595858
Coordinates   2118932..2120134 (+) Length   400 a.a.
NCBI ID   WP_077323349.1    Uniprot ID   -
Organism   Streptococcus pseudoporcinus strain NCTC10228     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2113932..2125134
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FQT45_RS10380 (NCTC10228_02139) - 2115145..2117730 (+) 2586 WP_077323347.1 YfhO family protein -
  FQT45_RS10400 (NCTC10228_02143) rlmH 2118256..2118735 (-) 480 WP_142355116.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  FQT45_RS10405 (NCTC10228_02144) htrA 2118932..2120134 (+) 1203 WP_077323349.1 S1C family serine protease Regulator
  FQT45_RS10410 (NCTC10228_02145) spo0J 2120211..2120984 (+) 774 WP_077323350.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 400 a.a.        Molecular weight: 42623.38 Da        Isoelectric Point: 6.7493

>NTDB_id=1128509 FQT45_RS10405 WP_077323349.1 2118932..2120134(+) (htrA) [Streptococcus pseudoporcinus strain NCTC10228]
MTIIKNISKLFGILVVGILGGVIAFFALSAFHPDFTNNQEGVAKPTTVSKVTYKNTTNTTKAVKVVQNAVVSVINYRKSD
SANQTYDIFGEARPSSKDDNGYSIYSEGSGVIYKKEGKEAYIVTNNHVIDKTDRIEILLADGSKVVGKLVGADTYSDLAV
VKVSSEKIKTIAKFANSANLNVGEVAIAIGSPLGTEYANSVTEGIVSSLSRTVTLRNDEGQTISTNAIQTDAAINPGNSG
GALINIEGQVIGINSSKISQSNASGNAVEGMGFAIPSNDVIKIINQLEAKGEVIRPAIGIRMVNLGDLSTNALNQLQVPE
DVKGGIVVASVIDNMPAVGKLKQYDIITEIDGEVVNTKSDLQSILYGHEINDDIKVTYYRGKEKKTTTIKLTKTTKDLKE

Nucleotide


Download         Length: 1203 bp        

>NTDB_id=1128509 FQT45_RS10405 WP_077323349.1 2118932..2120134(+) (htrA) [Streptococcus pseudoporcinus strain NCTC10228]
GTGACAATAATAAAAAATATTTCGAAACTATTTGGTATCTTGGTGGTTGGTATTCTTGGTGGTGTTATTGCTTTTTTCGC
ACTAAGTGCCTTTCACCCAGATTTTACTAATAATCAAGAGGGAGTTGCAAAACCCACAACAGTTAGTAAAGTGACTTATA
AAAATACGACTAATACTACAAAAGCTGTTAAAGTTGTTCAAAATGCTGTCGTTTCAGTCATTAATTATCGAAAATCTGAT
TCAGCTAATCAAACTTATGATATTTTTGGTGAAGCTAGACCTTCTTCAAAAGACGACAATGGTTACTCTATTTATAGTGA
AGGATCAGGGGTCATTTACAAAAAAGAAGGCAAAGAAGCCTATATTGTAACGAACAACCATGTTATTGACAAAACAGATA
GAATTGAAATTTTACTAGCCGATGGTTCAAAGGTAGTTGGTAAATTAGTAGGAGCTGACACATATTCTGATCTAGCAGTT
GTTAAAGTTTCTTCAGAAAAAATTAAGACAATTGCTAAATTTGCCAATTCTGCCAATTTAAACGTTGGTGAAGTGGCTAT
TGCTATTGGTAGCCCTTTAGGAACCGAGTATGCTAACTCTGTTACAGAAGGAATAGTATCAAGTTTAAGCAGAACAGTAA
CTCTTAGAAATGATGAAGGGCAGACCATTTCAACAAATGCTATTCAAACAGATGCAGCTATTAACCCAGGAAATTCTGGA
GGTGCTTTAATTAATATTGAAGGTCAAGTTATTGGAATTAATTCAAGTAAAATCTCACAATCTAACGCTTCTGGCAATGC
AGTTGAAGGAATGGGATTTGCAATTCCATCTAATGATGTTATTAAAATTATTAACCAGTTGGAAGCCAAGGGTGAGGTTA
TTCGACCAGCTATTGGAATTAGAATGGTAAACCTTGGTGATTTATCAACGAATGCTTTGAACCAACTTCAAGTACCAGAA
GATGTTAAAGGTGGTATTGTGGTTGCTTCAGTGATAGATAATATGCCTGCAGTTGGTAAACTAAAGCAATATGATATTAT
CACCGAAATTGATGGCGAAGTGGTGAATACAAAGTCTGATTTACAAAGTATCCTTTACGGTCATGAGATAAATGATGACA
TTAAAGTTACTTACTATCGTGGTAAAGAAAAGAAAACAACCACTATCAAATTAACAAAAACAACAAAAGATTTAAAGGAA
TAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(296-391)

Trypsin-like peptidase domain (Trypsin_2)

(108-253)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

60.969

98

0.597
  htrA Streptococcus gordonii str. Challis substr. CH1

54.135

99.75

0.54
  htrA Streptococcus pneumoniae Rx1

52.764

99.5

0.525
  htrA Streptococcus pneumoniae TIGR4

52.764

99.5

0.525
  htrA Streptococcus pneumoniae D39

52.764

99.5

0.525
  htrA Streptococcus pneumoniae R6

52.764

99.5

0.525
  htrA Streptococcus mitis NCTC 12261

53.197

97.75

0.52

Multiple sequence alignment