Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   FQT45_RS10410 Genome accession   NZ_LR595858
Coordinates   2120211..2120984 (+) Length   257 a.a.
NCBI ID   WP_077323350.1    Uniprot ID   A0A4U9YMC5
Organism   Streptococcus pseudoporcinus strain NCTC10228     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2115211..2125984
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FQT45_RS10400 (NCTC10228_02143) rlmH 2118256..2118735 (-) 480 WP_142355116.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  FQT45_RS10405 (NCTC10228_02144) htrA 2118932..2120134 (+) 1203 WP_077323349.1 S1C family serine protease Regulator
  FQT45_RS10410 (NCTC10228_02145) spo0J 2120211..2120984 (+) 774 WP_077323350.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 257 a.a.        Molecular weight: 29417.90 Da        Isoelectric Point: 7.1890

>NTDB_id=1128510 FQT45_RS10410 WP_077323350.1 2120211..2120984(+) (spo0J) [Streptococcus pseudoporcinus strain NCTC10228]
MTEELKEIRVEDIVANPHQPRLHFDHEELKELANSIKINGLIQPIIVRPSEIYGYELIAGERRLKASQLAGLEKVPAVIK
NISTTESMHQAIVENLQRSDLNPIEEAKAFQNILTKKQLTHEQLATFMGKSRPYITNSLRLLQLPDIILTALEEGKISSG
HARSLVTLDNSQDQEDYFHRIIDQDLSVRQTEQLVKFKKQAKKPQINTNIFIKAFEEELAKLLGLPIHIKLKKDGSGQLS
CFFQNEEELNRIINKLK

Nucleotide


Download         Length: 774 bp        

>NTDB_id=1128510 FQT45_RS10410 WP_077323350.1 2120211..2120984(+) (spo0J) [Streptococcus pseudoporcinus strain NCTC10228]
ATGACAGAAGAATTAAAAGAAATAAGAGTAGAAGATATTGTTGCTAACCCGCATCAACCTAGACTTCACTTTGATCATGA
AGAATTAAAGGAATTAGCAAACTCTATTAAAATAAATGGGCTCATACAACCTATTATCGTCAGACCATCCGAAATTTACG
GCTATGAATTAATTGCGGGTGAGAGACGTTTAAAGGCATCTCAGTTAGCTGGTTTAGAAAAAGTTCCAGCAGTTATTAAA
AATATTTCAACAACTGAAAGTATGCATCAAGCAATCGTGGAAAATCTTCAACGATCAGATTTAAATCCAATTGAAGAAGC
AAAAGCTTTTCAAAATATTCTTACTAAAAAGCAATTAACACATGAACAATTAGCCACCTTTATGGGCAAATCACGTCCCT
ACATCACTAATAGTCTCCGCCTTCTACAATTACCTGATATCATTTTAACTGCACTAGAAGAGGGAAAAATTAGTTCTGGC
CATGCACGTAGTTTAGTTACTTTAGATAATAGTCAAGATCAAGAGGATTATTTTCATCGCATTATTGACCAAGACCTCAG
CGTACGTCAGACTGAGCAGCTAGTAAAATTTAAAAAACAAGCTAAAAAGCCGCAGATAAACACAAATATTTTTATTAAAG
CCTTCGAAGAAGAACTTGCTAAATTACTAGGCCTGCCCATTCATATTAAACTAAAAAAAGATGGTAGTGGACAATTATCT
TGCTTTTTTCAGAATGAAGAAGAACTTAACAGAATTATCAACAAACTAAAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U9YMC5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

54.688

99.611

0.545


Multiple sequence alignment