Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   FGL20_RS07440 Genome accession   NZ_LR594050
Coordinates   1502222..1502770 (-) Length   182 a.a.
NCBI ID   WP_003084656.1    Uniprot ID   A0A4V0HCP2
Organism   Streptococcus porcinus strain NCTC10925     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1497222..1507770
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL20_RS07405 (NCTC10925_01492) - 1497551..1498291 (-) 741 WP_003084242.1 class I SAM-dependent DNA methyltransferase -
  FGL20_RS07410 (NCTC10925_01493) rsfS 1498350..1498703 (-) 354 WP_003085350.1 ribosome silencing factor -
  FGL20_RS07415 (NCTC10925_01494) yqeK 1498818..1499411 (-) 594 WP_003082685.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  FGL20_RS07420 (NCTC10925_01495) - 1499408..1500040 (-) 633 WP_003084589.1 nicotinate-nucleotide adenylyltransferase -
  FGL20_RS07425 (NCTC10925_01496) yhbY 1500108..1500416 (-) 309 WP_003083880.1 ribosome assembly RNA-binding protein YhbY -
  FGL20_RS07430 (NCTC10925_01497) yqeH 1500476..1501591 (-) 1116 WP_003085998.1 ribosome biogenesis GTPase YqeH -
  FGL20_RS07435 (NCTC10925_01498) - 1501591..1502118 (-) 528 WP_003086046.1 YqeG family HAD IIIA-type phosphatase -
  FGL20_RS07440 (NCTC10925_01499) comX/sigX/comX2/sigX2 1502222..1502770 (-) 549 WP_003084656.1 sigma-70 family RNA polymerase sigma factor Regulator

Sequence

Protein


Download         Length: 182 a.a.        Molecular weight: 22082.82 Da        Isoelectric Point: 10.2387

>NTDB_id=1128053 FGL20_RS07440 WP_003084656.1 1502222..1502770(-) (comX/sigX/comX2/sigX2) [Streptococcus porcinus strain NCTC10925]
MFFFVTFFYNMTIILKEGVTKKSMYNIELNELFSHVKPIIFKLMRSYFIQLWETDDWLQEGRLVLYNLIESNPELRNNQK
KLFVYFKTKFSSHIKDTIRHQESFKRKLNRLPYQEISEVSHRIPEKGLVLDDFVAYQSIIEELKPYLTTKEKSQFKALLR
GERFSGRKSLLRKLKPFFIDFQ

Nucleotide


Download         Length: 549 bp        

>NTDB_id=1128053 FGL20_RS07440 WP_003084656.1 1502222..1502770(-) (comX/sigX/comX2/sigX2) [Streptococcus porcinus strain NCTC10925]
ATGTTCTTTTTTGTAACTTTCTTTTACAATATGACTATTATTTTGAAAGAAGGTGTTACTAAAAAGTCTATGTATAATAT
TGAATTAAATGAATTATTTAGCCATGTAAAGCCAATTATTTTTAAGTTAATGCGGAGCTACTTTATTCAACTATGGGAAA
CTGATGATTGGCTACAAGAGGGACGTCTAGTTCTATATAATCTTATTGAAAGTAATCCTGAGTTAAGAAACAATCAAAAA
AAGTTATTTGTATATTTTAAAACTAAATTTTCATCCCACATAAAAGATACCATTCGTCACCAGGAATCATTCAAACGAAA
ATTGAATCGCTTACCATATCAAGAAATTAGTGAAGTTTCCCATCGGATACCTGAAAAGGGTCTTGTCCTTGATGATTTTG
TTGCTTATCAGTCAATTATTGAAGAATTGAAGCCGTATTTAACTACCAAAGAAAAAAGTCAATTTAAAGCATTGTTAAGA
GGAGAGCGCTTTTCTGGGCGAAAATCTTTACTACGTAAGTTAAAACCATTCTTTATAGATTTTCAATAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4V0HCP2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.