Detailed information NTG1127614

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: FGL16_RS00875
• Genome accession: NZ_LR594043
• Coordinates: 133790..134224 (+)
• Length: 144 a.a.
• NCBI ID: WP_014735293.1
• Uniprot ID: -
• Organism: Streptococcus suis strain NCTC10237
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 128790..139224

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGL16_RS00840 (NCTC10237_00163)	-	129531..129896 (+)	366	WP_014735287.1	DUF1033 family protein	-
FGL16_RS00845 (NCTC10237_00164)	-	129931..130881 (-)	951	WP_014735288.1	S66 peptidase family protein	-
FGL16_RS00850	comGA	130967..131918 (+)	952	Protein_123	competence type IV pilus ATPase ComGA	-
FGL16_RS00855 (NCTC10237_00167)	comYB	131830..132867 (+)	1038	WP_268739958.1	competence type IV pilus assembly protein ComGB	Machinery gene
FGL16_RS00860 (NCTC10237_00168)	comYC	132869..133150 (+)	282	WP_014735290.1	competence type IV pilus major pilin ComGC	Machinery gene
FGL16_RS00865 (NCTC10237_00169)	comGD	133131..133538 (+)	408	WP_014735291.1	competence type IV pilus minor pilin ComGD	-
FGL16_RS00870 (NCTC10237_00170)	comYE	133510..133803 (+)	294	WP_024405248.1	competence type IV pilus minor pilin ComGE	Machinery gene
FGL16_RS00875 (NCTC10237_00171)	comGF/cglF	133790..134224 (+)	435	WP_014735293.1	competence type IV pilus minor pilin ComGF	Machinery gene
FGL16_RS00880 (NCTC10237_00172)	comGG	134202..134723 (+)	522	WP_014735294.1	competence type IV pilus minor pilin ComGG	-
FGL16_RS00885 (NCTC10237_00173)	comYH	134780..135733 (+)	954	WP_014735295.1	class I SAM-dependent methyltransferase	Machinery gene
FGL16_RS00890 (NCTC10237_00174)	-	135783..136970 (+)	1188	WP_012775422.1	acetate kinase	-
FGL16_RS00895 (NCTC10237_00175)	-	137285..137836 (+)	552	WP_012774908.1	folate family ECF transporter S component	-
FGL16_RS00900 (NCTC10237_00176)	-	137892..139148 (+)	1257	WP_011921729.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16447.80 Da
• Isoelectric Point: 7.9752

>NTDB_id=1127614 FGL16_RS00875 WP_014735293.1 133790..134224(+) (comGF/cglF) [Streptococcus suis strain NCTC10237]
MLKSKIPAFTLLECLVALVILSGSLLVFEGLSKLLVQEAHYQGQTVQKEWLVFSSQLRSEWDQAELVKVENGKVYVNKGE
QALAFGKSRSDDFRKTNDRGQGYQPMLYQVDSAAISRENQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=1127614 FGL16_RS00875 WP_014735293.1 133790..134224(+) (comGF/cglF) [Streptococcus suis strain NCTC10237]
TTGTTAAAAAGTAAAATTCCTGCTTTTACTCTCTTGGAATGCTTGGTAGCCTTAGTCATCCTTTCAGGTAGTCTTCTGGT
CTTTGAAGGCTTGTCAAAACTGCTGGTCCAAGAAGCGCATTACCAAGGTCAGACCGTTCAAAAGGAATGGTTGGTCTTCT
CTAGTCAATTGCGGTCGGAGTGGGACCAGGCTGAATTGGTCAAGGTTGAAAATGGCAAGGTCTATGTCAACAAAGGCGAA
CAGGCTTTGGCCTTTGGCAAGTCACGGTCGGATGATTTTCGGAAAACAAATGACAGGGGACAGGGTTACCAGCCCATGCT
CTATCAGGTGGATAGCGCAGCCATTTCCCGAGAAAACCAGCTGGTGCGCATCGACTTTAGCTTTAAAAACGGAGAGGAGC
GAACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae TIGR4	53.191	97.917	0.521
comGF/cglF	Streptococcus pneumoniae Rx1	53.191	97.917	0.521
comGF/cglF	Streptococcus pneumoniae D39	53.191	97.917	0.521
comGF/cglF	Streptococcus pneumoniae R6	53.191	97.917	0.521
comGF/cglF	Streptococcus mitis NCTC 12261	53.731	93.056	0.5
comYF	Streptococcus mutans UA140	49.306	100	0.493
comYF	Streptococcus mutans UA159	48.611	100	0.486
comGF/cglF	Streptococcus mitis SK321	50.746	93.056	0.472
comGF	Lactococcus lactis subsp. cremoris KW2	46.809	97.917	0.458