Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   FGL06_RS09220 Genome accession   NZ_LR594042
Coordinates   1865367..1866626 (+) Length   419 a.a.
NCBI ID   WP_033153623.1    Uniprot ID   -
Organism   Streptococcus equinus strain NCTC8133     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1860367..1871626
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL06_RS09195 (NCTC8133_01866) - 1861254..1863836 (+) 2583 WP_126438184.1 YfhO family protein -
  FGL06_RS09215 (NCTC8133_01870) rlmH 1864675..1865154 (-) 480 WP_027968267.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  FGL06_RS09220 (NCTC8133_01871) htrA 1865367..1866626 (+) 1260 WP_033153623.1 S1C family serine protease Regulator
  FGL06_RS09225 (NCTC8133_01872) spo0J 1866687..1867469 (+) 783 WP_126438185.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 43509.36 Da        Isoelectric Point: 4.4136

>NTDB_id=1127600 FGL06_RS09220 WP_033153623.1 1865367..1866626(+) (htrA) [Streptococcus equinus strain NCTC8133]
MKKVNFPKVKSKKILKPLSVILIGFIGGVAGTLLILNMAGISINNVSGSSTKTTTSKVSYSNSNDTTKAVSKVQDAVVSV
INYQSNTSSNDLYAQLFGDNANSNNSTSDDDLNISSEGSGVIYKKDGNSAYVVTNNHVVDGAEQLEIMLSDGTKVVGELV
GADTYSDIAVVKIASDKVSTVAEFADSAKITVGETAIAIGSPLGTDYANSVTQGIVSSLSRTVTMTNDDGETISTNAIQT
DAAINPGNSGGALINIEGQVIGINSSKISSTSSSGESVEGMGFAIPSNDVVKIINQLEENGKVIRPALGITMANLSDLST
VSISHLNIPTSVTGGVVVASVQSGMPAEGTLERYDVITAIDDEEVNSITDLQSILYGHSTGDSVKVTFYRGTTKKTETIK
LTKTTQDLSSSSDSSNQNQ

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=1127600 FGL06_RS09220 WP_033153623.1 1865367..1866626(+) (htrA) [Streptococcus equinus strain NCTC8133]
ATGAAAAAAGTCAATTTTCCAAAAGTTAAATCAAAAAAAATTCTCAAGCCGCTGTCTGTCATTTTAATCGGATTCATCGG
AGGTGTAGCTGGGACGCTACTGATTTTAAATATGGCTGGCATTTCGATAAATAACGTTAGCGGTTCAAGCACTAAAACTA
CCACAAGTAAAGTAAGTTATTCAAATTCTAATGATACGACAAAAGCCGTTTCAAAAGTTCAAGACGCTGTCGTATCCGTT
ATTAATTATCAATCAAATACTTCATCAAATGATCTGTACGCTCAATTATTTGGTGATAATGCAAATAGCAACAATTCAAC
ATCTGATGACGATTTAAACATCTCTAGCGAAGGTTCTGGTGTTATTTACAAAAAAGATGGAAATTCTGCTTACGTTGTAA
CAAATAACCACGTCGTTGACGGCGCTGAACAGCTCGAAATCATGCTATCTGACGGTACAAAAGTCGTTGGTGAATTAGTC
GGAGCTGATACTTATTCAGATATTGCGGTTGTCAAAATTGCTTCTGATAAAGTTTCTACCGTTGCCGAATTTGCCGACTC
AGCAAAAATTACTGTCGGAGAAACAGCTATTGCCATTGGTAGCCCGCTTGGAACTGACTACGCAAACTCTGTAACACAAG
GAATTGTCTCAAGTCTAAGTCGTACAGTAACAATGACTAATGACGATGGTGAAACTATCTCAACAAATGCTATCCAAACC
GATGCTGCTATTAACCCAGGTAACTCTGGAGGTGCTTTGATTAATATCGAAGGACAAGTTATCGGTATCAACTCAAGTAA
AATTTCTTCAACATCTAGTTCAGGTGAGTCTGTAGAAGGTATGGGATTTGCCATTCCATCTAATGATGTCGTCAAAATCA
TCAATCAATTGGAAGAAAACGGAAAAGTTATTCGTCCAGCACTTGGTATCACAATGGCTAACTTAAGCGATCTCTCAACT
GTATCTATTAGCCACCTCAACATTCCAACTAGCGTCACTGGTGGTGTTGTTGTTGCTTCAGTACAATCAGGTATGCCTGC
TGAAGGAACTCTTGAAAGATACGATGTCATCACAGCTATTGATGACGAAGAAGTTAACTCAATCACAGACCTTCAAAGTA
TTCTTTACGGACACTCAACTGGAGACTCTGTCAAAGTTACTTTCTACCGCGGTACAACTAAGAAAACTGAAACAATTAAA
CTAACTAAAACAACTCAAGACCTCTCTTCTTCATCAGATTCATCAAATCAAAATCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

63.861

96.42

0.616

  htrA Streptococcus gordonii str. Challis substr. CH1

61.097

95.704

0.585

  htrA Streptococcus mitis NCTC 12261

59.259

96.659

0.573

  htrA Streptococcus pneumoniae TIGR4

59.649

95.227

0.568

  htrA Streptococcus pneumoniae D39

59.649

95.227

0.568

  htrA Streptococcus pneumoniae Rx1

59.649

95.227

0.568

  htrA Streptococcus pneumoniae R6

59.649

95.227

0.568


Multiple sequence alignment