Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   FGL06_RS09225 Genome accession   NZ_LR594042
Coordinates   1866687..1867469 (+) Length   260 a.a.
NCBI ID   WP_126438185.1    Uniprot ID   -
Organism   Streptococcus equinus strain NCTC8133     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1861687..1872469
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL06_RS09215 (NCTC8133_01870) rlmH 1864675..1865154 (-) 480 WP_027968267.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  FGL06_RS09220 (NCTC8133_01871) htrA 1865367..1866626 (+) 1260 WP_033153623.1 S1C family serine protease Regulator
  FGL06_RS09225 (NCTC8133_01872) spo0J 1866687..1867469 (+) 783 WP_126438185.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 260 a.a.        Molecular weight: 29817.51 Da        Isoelectric Point: 10.0077

>NTDB_id=1127601 FGL06_RS09225 WP_126438185.1 1866687..1867469(+) (spo0J) [Streptococcus equinus strain NCTC8133]
MTETLNLINIGDISPNPYQPRLEFKQEELEELSRSIKANGLIQPIIVRKSAIFGYELIAGERRLKASKMAGLSEIPAIIK
EISNKESMQLAIVENLQRSDLNPIEEAKAYQQLLDRNQMTHEELAQFMGKSRPYITNCLRLLNLPSAISKAVERGQLSQG
HARVLLTLKNEKEQEKWYQKVITEEISVRKLEELVKKSKPTKKSSQKNKKNIFIRHQEEELSKLLGVPVSLSLAKSGFKG
DLQLHFQSEEDFNRIINRLK

Nucleotide


Download         Length: 783 bp        

>NTDB_id=1127601 FGL06_RS09225 WP_126438185.1 1866687..1867469(+) (spo0J) [Streptococcus equinus strain NCTC8133]
ATGACTGAGACACTTAACCTAATAAATATTGGCGATATTTCTCCAAATCCTTACCAACCACGCTTAGAATTTAAACAAGA
AGAATTAGAAGAGCTATCTCGATCAATCAAAGCTAATGGCCTTATTCAGCCCATTATCGTTCGAAAATCCGCTATCTTTG
GATATGAGCTTATAGCAGGAGAGAGACGTCTTAAAGCTTCTAAAATGGCTGGTTTGAGCGAAATTCCAGCGATTATCAAA
GAAATTTCTAATAAAGAAAGTATGCAACTGGCTATTGTCGAAAATTTGCAACGTTCAGACCTTAATCCTATCGAAGAAGC
AAAAGCCTATCAGCAATTATTAGACAGAAATCAGATGACACACGAAGAATTGGCTCAATTCATGGGAAAATCTCGTCCTT
ACATCACCAATTGCTTACGATTATTGAATTTACCAAGTGCCATTTCTAAAGCCGTTGAGCGAGGGCAACTATCCCAAGGT
CACGCGCGCGTGCTTCTCACATTAAAAAATGAAAAAGAACAAGAGAAGTGGTACCAAAAAGTCATCACTGAAGAAATTAG
TGTCCGAAAACTGGAAGAACTGGTCAAAAAATCTAAACCCACTAAAAAATCTTCGCAAAAAAATAAAAAAAATATTTTTA
TTCGTCATCAAGAAGAAGAACTGTCAAAATTATTAGGAGTCCCAGTTAGCTTATCCCTTGCCAAATCAGGCTTCAAGGGA
GATTTGCAATTGCATTTTCAGAGCGAAGAAGACTTTAACAGAATTATCAACAGGCTAAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

60.385

100

0.604


Multiple sequence alignment