Detailed information NTG1127549

Bioinformatically predicted

Overview

• Name: comYF
• Type: Machinery gene
• Locus tag: FGL06_RS00650
• Genome accession: NZ_LR594042
• Coordinates: 99109..99546 (+)
• Length: 145 a.a.
• NCBI ID: WP_126437531.1
• Uniprot ID: -
• Organism: Streptococcus equinus strain NCTC8133
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 94109..104546

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGL06_RS00620 (NCTC8133_00123)	-	95816..96184 (+)	369	WP_021141429.1	DUF1033 family protein	-
FGL06_RS00625 (NCTC8133_00124)	comYA	96253..97194 (+)	942	WP_027968018.1	competence type IV pilus ATPase ComGA	Machinery gene
FGL06_RS00630 (NCTC8133_00125)	comYB	97118..98161 (+)	1044	WP_164554342.1	competence type IV pilus assembly protein ComGB	Machinery gene
FGL06_RS00635 (NCTC8133_00126)	comYC	98161..98463 (+)	303	WP_021141433.1	competence type IV pilus major pilin ComGC	Machinery gene
FGL06_RS00640 (NCTC8133_00127)	comGD	98438..98878 (+)	441	WP_126437530.1	competence type IV pilus minor pilin ComGD	-
FGL06_RS00645 (NCTC8133_00128)	comGE	98832..99125 (+)	294	WP_039697664.1	competence type IV pilus minor pilin ComGE	-
FGL06_RS00650 (NCTC8133_00129)	comYF	99109..99546 (+)	438	WP_126437531.1	competence type IV pilus minor pilin ComGF	Machinery gene
FGL06_RS00655 (NCTC8133_00130)	comGG	99533..99868 (+)	336	WP_003067902.1	competence type IV pilus minor pilin ComGG	-
FGL06_RS00660 (NCTC8133_00131)	comYH	99922..100878 (+)	957	WP_024344497.1	class I SAM-dependent methyltransferase	Machinery gene
FGL06_RS00665 (NCTC8133_00132)	-	100932..102128 (+)	1197	WP_138083561.1	acetate kinase	-
FGL06_RS00670 (NCTC8133_00133)	-	102286..102483 (+)	198	WP_021141442.1	helix-turn-helix transcriptional regulator	-
FGL06_RS00675 (NCTC8133_00134)	-	102538..102990 (+)	453	WP_126437532.1	ABC transporter permease	-
FGL06_RS00680 (NCTC8133_00135)	-	103002..103637 (+)	636	WP_027968028.1	CPBP family intramembrane glutamic endopeptidase	-
FGL06_RS00685 (NCTC8133_00136)	proC	103689..104459 (-)	771	WP_024344501.1	pyrroline-5-carboxylate reductase	-

Sequence

Protein

• Length: 145 a.a.
• Molecular weight: 16646.92 Da
• Isoelectric Point: 5.2435

>NTDB_id=1127549 FGL06_RS00650 WP_126437531.1 99109..99546(+) (comYF) [Streptococcus equinus strain NCTC8133]
MLRRTRLKAFTLLESLVALLVISGTVLVYQGLTQSISQNVYYLSDNEENEWLLFSQQLRLELERCHLDCVSDNKLYVSKD
DKKLAYGLSKADDFRKTNASGQGYQPMLFGVNSSSIRQDGNNILIKLRMDNGMEREFVYTFDEAS

Nucleotide

• Length: 438 bp

>NTDB_id=1127549 FGL06_RS00650 WP_126437531.1 99109..99546(+) (comYF) [Streptococcus equinus strain NCTC8133]
ATGTTAAGAAGAACTAGACTAAAAGCTTTTACGTTACTTGAAAGTTTGGTTGCTTTGCTGGTTATTTCAGGGACAGTTCT
GGTTTATCAAGGGCTAACGCAGTCAATTTCACAAAATGTTTATTACTTGTCTGATAACGAAGAAAATGAGTGGCTTTTAT
TTTCTCAGCAGCTACGCTTAGAATTAGAGCGATGCCACTTAGATTGTGTTTCTGACAATAAACTTTATGTTAGTAAGGAT
GATAAGAAATTAGCTTATGGGCTATCAAAAGCAGATGATTTTCGTAAAACAAATGCTTCTGGTCAAGGCTATCAGCCAAT
GTTATTTGGTGTTAATTCTTCTAGCATTCGTCAGGATGGTAATAATATTTTGATTAAGCTGCGAATGGATAATGGTATGG
AGAGAGAGTTTGTTTACACTTTTGATGAGGCAAGTTAG

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (42-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYF	Streptococcus mutans UA140	55	96.552	0.531
comYF	Streptococcus mutans UA159	54.286	96.552	0.524
comGF	Lactococcus lactis subsp. cremoris KW2	47.826	95.172	0.455
comGF/cglF	Streptococcus pneumoniae Rx1	47.101	95.172	0.448
comGF/cglF	Streptococcus pneumoniae D39	47.101	95.172	0.448
comGF/cglF	Streptococcus pneumoniae R6	47.101	95.172	0.448
comGF/cglF	Streptococcus pneumoniae TIGR4	47.101	95.172	0.448
comGF/cglF	Streptococcus mitis NCTC 12261	45.324	95.862	0.434
comGF/cglF	Streptococcus mitis SK321	44.604	95.862	0.428