Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | FGL06_RS00660 | Genome accession | NZ_LR594042 |
| Coordinates | 99922..100878 (+) | Length | 318 a.a. |
| NCBI ID | WP_024344497.1 | Uniprot ID | A0A239RCI2 |
| Organism | Streptococcus equinus strain NCTC8133 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 94922..105878
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGL06_RS00620 (NCTC8133_00123) | - | 95816..96184 (+) | 369 | WP_021141429.1 | DUF1033 family protein | - |
| FGL06_RS00625 (NCTC8133_00124) | comYA | 96253..97194 (+) | 942 | WP_027968018.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| FGL06_RS00630 (NCTC8133_00125) | comYB | 97118..98161 (+) | 1044 | WP_164554342.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| FGL06_RS00635 (NCTC8133_00126) | comYC | 98161..98463 (+) | 303 | WP_021141433.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| FGL06_RS00640 (NCTC8133_00127) | comGD | 98438..98878 (+) | 441 | WP_126437530.1 | competence type IV pilus minor pilin ComGD | - |
| FGL06_RS00645 (NCTC8133_00128) | comGE | 98832..99125 (+) | 294 | WP_039697664.1 | competence type IV pilus minor pilin ComGE | - |
| FGL06_RS00650 (NCTC8133_00129) | comYF | 99109..99546 (+) | 438 | WP_126437531.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| FGL06_RS00655 (NCTC8133_00130) | comGG | 99533..99868 (+) | 336 | WP_003067902.1 | competence type IV pilus minor pilin ComGG | - |
| FGL06_RS00660 (NCTC8133_00131) | comYH | 99922..100878 (+) | 957 | WP_024344497.1 | class I SAM-dependent methyltransferase | Machinery gene |
| FGL06_RS00665 (NCTC8133_00132) | - | 100932..102128 (+) | 1197 | WP_138083561.1 | acetate kinase | - |
| FGL06_RS00670 (NCTC8133_00133) | - | 102286..102483 (+) | 198 | WP_021141442.1 | helix-turn-helix transcriptional regulator | - |
| FGL06_RS00675 (NCTC8133_00134) | - | 102538..102990 (+) | 453 | WP_126437532.1 | ABC transporter permease | - |
| FGL06_RS00680 (NCTC8133_00135) | - | 103002..103637 (+) | 636 | WP_027968028.1 | CPBP family intramembrane glutamic endopeptidase | - |
| FGL06_RS00685 (NCTC8133_00136) | proC | 103689..104459 (-) | 771 | WP_024344501.1 | pyrroline-5-carboxylate reductase | - |
| FGL06_RS00690 (NCTC8133_00137) | pepA | 104521..105588 (-) | 1068 | WP_024344502.1 | glutamyl aminopeptidase | - |
Sequence
Protein
Download Length: 318 a.a. Molecular weight: 35783.86 Da Isoelectric Point: 4.4780
>NTDB_id=1127550 FGL06_RS00660 WP_024344497.1 99922..100878(+) (comYH) [Streptococcus equinus strain NCTC8133]
MNFENIETAYGLILENIQLIENELKTHIYDALIEQNSFYLGAEGASEVVAANNEKLRQLNLTKEEWRRAFQFIFIKAAQT
EALQANHQFTPDAIGFILMFLIENLTASKELDVLEIGSGTGNLAQTLLNNSSKDLNYLGIEVDDLLIDLSASIAEVMDSK
AQFVQEDAVRPQILKESDVIISDLPVGFYPNDEIAKRYKVASSEGHTYAHHLLMEQSLKYLKKDGIAVFLAPVSLLTSKQ
SDLLKAWLKDYADVIAVITLPESIFGNAANAKSIFVLKKQAEHTPETFVYPLADLQSREVLTDFIDKFKKWNVENMIF
MNFENIETAYGLILENIQLIENELKTHIYDALIEQNSFYLGAEGASEVVAANNEKLRQLNLTKEEWRRAFQFIFIKAAQT
EALQANHQFTPDAIGFILMFLIENLTASKELDVLEIGSGTGNLAQTLLNNSSKDLNYLGIEVDDLLIDLSASIAEVMDSK
AQFVQEDAVRPQILKESDVIISDLPVGFYPNDEIAKRYKVASSEGHTYAHHLLMEQSLKYLKKDGIAVFLAPVSLLTSKQ
SDLLKAWLKDYADVIAVITLPESIFGNAANAKSIFVLKKQAEHTPETFVYPLADLQSREVLTDFIDKFKKWNVENMIF
Nucleotide
Download Length: 957 bp
>NTDB_id=1127550 FGL06_RS00660 WP_024344497.1 99922..100878(+) (comYH) [Streptococcus equinus strain NCTC8133]
ATGAATTTTGAAAATATCGAAACAGCCTATGGGTTGATTCTTGAAAATATACAATTAATCGAAAATGAGTTGAAAACACA
CATTTACGATGCACTTATTGAACAAAACTCTTTTTATCTTGGTGCTGAGGGTGCCAGTGAAGTTGTAGCTGCAAATAATG
AGAAACTACGCCAACTTAACTTAACTAAGGAAGAATGGCGCCGTGCTTTTCAGTTTATCTTTATTAAAGCTGCGCAAACA
GAAGCTCTTCAGGCAAATCACCAATTTACACCTGATGCTATTGGCTTCATTTTAATGTTCCTCATTGAGAATTTGACAGC
TTCTAAGGAACTTGATGTTTTGGAAATCGGTAGCGGAACAGGTAACCTTGCCCAAACGTTGTTGAACAACTCATCTAAAG
ACCTAAACTATCTAGGGATTGAAGTTGATGATTTGTTGATTGACTTGTCAGCAAGTATCGCTGAAGTTATGGATTCTAAA
GCTCAATTCGTTCAAGAAGATGCTGTACGCCCACAGATTCTTAAGGAAAGTGATGTCATCATCAGTGACCTTCCAGTCGG
ATTCTATCCAAATGATGAAATTGCAAAACGTTACAAAGTAGCTAGCAGTGAAGGGCACACTTATGCGCATCATTTGTTGA
TGGAACAATCTCTTAAATATCTCAAAAAAGACGGGATTGCTGTCTTTTTAGCACCAGTTAGTCTTTTGACAAGTAAGCAA
AGTGACCTGTTGAAAGCATGGTTGAAGGATTATGCTGATGTGATTGCTGTAATTACTTTGCCAGAATCTATCTTTGGAAA
TGCAGCCAACGCGAAATCAATTTTCGTTTTGAAAAAACAAGCTGAACATACTCCAGAAACCTTTGTTTATCCACTTGCTG
ACTTGCAAAGTCGAGAAGTGTTGACAGACTTCATTGATAAATTTAAAAAATGGAATGTTGAAAATATGATTTTTTAA
ATGAATTTTGAAAATATCGAAACAGCCTATGGGTTGATTCTTGAAAATATACAATTAATCGAAAATGAGTTGAAAACACA
CATTTACGATGCACTTATTGAACAAAACTCTTTTTATCTTGGTGCTGAGGGTGCCAGTGAAGTTGTAGCTGCAAATAATG
AGAAACTACGCCAACTTAACTTAACTAAGGAAGAATGGCGCCGTGCTTTTCAGTTTATCTTTATTAAAGCTGCGCAAACA
GAAGCTCTTCAGGCAAATCACCAATTTACACCTGATGCTATTGGCTTCATTTTAATGTTCCTCATTGAGAATTTGACAGC
TTCTAAGGAACTTGATGTTTTGGAAATCGGTAGCGGAACAGGTAACCTTGCCCAAACGTTGTTGAACAACTCATCTAAAG
ACCTAAACTATCTAGGGATTGAAGTTGATGATTTGTTGATTGACTTGTCAGCAAGTATCGCTGAAGTTATGGATTCTAAA
GCTCAATTCGTTCAAGAAGATGCTGTACGCCCACAGATTCTTAAGGAAAGTGATGTCATCATCAGTGACCTTCCAGTCGG
ATTCTATCCAAATGATGAAATTGCAAAACGTTACAAAGTAGCTAGCAGTGAAGGGCACACTTATGCGCATCATTTGTTGA
TGGAACAATCTCTTAAATATCTCAAAAAAGACGGGATTGCTGTCTTTTTAGCACCAGTTAGTCTTTTGACAAGTAAGCAA
AGTGACCTGTTGAAAGCATGGTTGAAGGATTATGCTGATGTGATTGCTGTAATTACTTTGCCAGAATCTATCTTTGGAAA
TGCAGCCAACGCGAAATCAATTTTCGTTTTGAAAAAACAAGCTGAACATACTCCAGAAACCTTTGTTTATCCACTTGCTG
ACTTGCAAAGTCGAGAAGTGTTGACAGACTTCATTGATAAATTTAAAAAATGGAATGTTGAAAATATGATTTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
68.987 |
99.371 |
0.686 |
| comYH | Streptococcus mutans UA159 |
68.671 |
99.371 |
0.682 |