Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   FGK96_RS10420 Genome accession   NZ_LR594036
Coordinates   2158481..2159683 (+) Length   400 a.a.
NCBI ID   WP_138083463.1    Uniprot ID   A0A4V0A3G9
Organism   Streptococcus porcinus strain NCTC10710     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2153481..2164683
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGK96_RS10395 (NCTC10710_02146) - 2154696..2157284 (+) 2589 WP_138083462.1 YfhO family protein -
  FGK96_RS10415 (NCTC10710_02150) rlmH 2157805..2158284 (-) 480 WP_138083538.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  FGK96_RS10420 (NCTC10710_02151) htrA 2158481..2159683 (+) 1203 WP_138083463.1 S1C family serine protease Regulator
  FGK96_RS10425 (NCTC10710_02152) spo0J 2159760..2160533 (+) 774 WP_138083464.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 400 a.a.        Molecular weight: 42616.46 Da        Isoelectric Point: 7.3097

>NTDB_id=1127380 FGK96_RS10420 WP_138083463.1 2158481..2159683(+) (htrA) [Streptococcus porcinus strain NCTC10710]
MTIIKNIWKLVGILVVGILGGIIAFFTLSVFHPDFTNNQEGITKPTTISKVTYKNTTNTTKAVKVVQNAVVSVINYRKSS
PANQANDIFGEPKSSLNDDNGYSIYSEGSGVIYKKEGKDAYIVTNNHVIDKTDRIEILLADGSKIVGKLVGADTYSDLAV
VKVPSEKIKSVAKFANSANLNVGEVAIAIGSPLGTEYANSVTEGIVSSLSRTVTLKNDEGQTISTNAIQTDAAINPGNSG
GALINIEGQVIGINSSKISQSNASGNAVEGIGFAIPANDVIKIINQLEAKGEVIRPAIGIRMVNLGDLSTNALNQLQVPE
NVKGGIVVASVIDNMPAVGKLKQYDIITEIDGETVNTKSDLQTILYSHEINDSIKVTYYRGKDKKTTTIKLTKTTKDLNE

Nucleotide


Download         Length: 1203 bp        

>NTDB_id=1127380 FGK96_RS10420 WP_138083463.1 2158481..2159683(+) (htrA) [Streptococcus porcinus strain NCTC10710]
GTGACAATAATAAAAAATATTTGGAAACTAGTTGGTATCTTGGTTGTTGGTATTCTTGGTGGTATAATCGCTTTTTTCAC
ATTAAGTGTCTTTCACCCTGATTTTACTAATAATCAAGAAGGAATTACTAAGCCTACAACAATTAGTAAAGTAACTTATA
AAAATACAACCAATACTACAAAAGCTGTTAAGGTTGTTCAAAATGCTGTCGTTTCGGTCATTAATTATCGAAAATCTAGT
CCTGCTAATCAAGCAAATGATATCTTTGGTGAACCTAAATCCTCTTTAAATGACGATAATGGTTACTCTATCTACAGCGA
AGGGTCAGGAGTCATTTACAAAAAAGAAGGTAAGGATGCCTATATTGTAACGAATAACCATGTTATTGACAAAACAGATA
GAATTGAAATCTTATTAGCTGATGGTTCAAAAATAGTTGGTAAACTAGTAGGAGCGGACACCTATTCTGACTTAGCAGTT
GTTAAAGTTCCTTCTGAAAAAATAAAATCAGTTGCTAAATTTGCTAACTCTGCCAATTTAAACGTTGGGGAAGTAGCTAT
TGCTATTGGTAGTCCCCTTGGAACTGAATATGCTAACTCTGTCACTGAAGGAATAGTCTCAAGCTTAAGTAGAACAGTAA
CACTTAAAAATGATGAGGGTCAGACAATTTCAACAAATGCTATTCAAACAGATGCTGCTATTAATCCAGGAAATTCTGGA
GGTGCTTTAATTAATATTGAAGGACAAGTTATTGGTATTAATTCAAGCAAAATCTCACAATCTAATGCTTCTGGCAATGC
AGTTGAAGGAATAGGATTTGCAATTCCAGCTAATGATGTCATTAAAATTATTAATCAGCTGGAAGCTAAGGGTGAAGTTA
TTCGACCAGCTATCGGAATTAGAATGGTTAACCTTGGTGACTTATCGACAAATGCCTTGAACCAACTTCAAGTACCAGAA
AATGTTAAAGGTGGTATTGTAGTTGCTTCCGTGATAGACAATATGCCTGCTGTTGGTAAATTGAAACAATATGACATAAT
CACTGAAATCGATGGTGAAACAGTAAATACAAAATCTGATTTACAAACTATACTTTATAGTCATGAGATAAATGATAGCA
TTAAAGTTACTTACTATCGCGGTAAAGATAAGAAAACAACTACTATCAAATTGACCAAAACAACAAAAGATTTAAATGAA
TAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4V0A3G9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

59.847

97.75

0.585

  htrA Streptococcus gordonii str. Challis substr. CH1

53.383

99.75

0.532

  htrA Streptococcus pneumoniae Rx1

52.897

99.25

0.525

  htrA Streptococcus pneumoniae R6

52.897

99.25

0.525

  htrA Streptococcus pneumoniae TIGR4

52.897

99.25

0.525

  htrA Streptococcus pneumoniae D39

52.897

99.25

0.525

  htrA Streptococcus mitis NCTC 12261

52.897

99.25

0.525


Multiple sequence alignment