Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   FGK96_RS10425 Genome accession   NZ_LR594036
Coordinates   2159760..2160533 (+) Length   257 a.a.
NCBI ID   WP_138083464.1    Uniprot ID   A0A4V0A5J3
Organism   Streptococcus porcinus strain NCTC10710     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2154760..2165533
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGK96_RS10415 (NCTC10710_02150) rlmH 2157805..2158284 (-) 480 WP_138083538.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  FGK96_RS10420 (NCTC10710_02151) htrA 2158481..2159683 (+) 1203 WP_138083463.1 S1C family serine protease Regulator
  FGK96_RS10425 (NCTC10710_02152) spo0J 2159760..2160533 (+) 774 WP_138083464.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 257 a.a.        Molecular weight: 29344.93 Da        Isoelectric Point: 8.1089

>NTDB_id=1127381 FGK96_RS10425 WP_138083464.1 2159760..2160533(+) (spo0J) [Streptococcus porcinus strain NCTC10710]
MTEELKEIKIEDIVANPYQPRLHFNHDELKELANSIKINGLIQPIIVRPSEIYGYELIAGERRLKASQLAGLEKVPAIIK
NISTTESMHQAIVENLQRSDLNPIEEAKAFQTILTKKQLTHEQLATFMGKSRPYITNSIRLLQLPDIILSALEEGKISTG
HARSLVTLNKSQDQENYFHRIIDQDLSVRQTEQLVKLKKQTKKPQIDKDIFIKALEEELAKSLGLSIHIKLKKDGSGQLS
CLFHDDEELNRIINKLK

Nucleotide


Download         Length: 774 bp        

>NTDB_id=1127381 FGK96_RS10425 WP_138083464.1 2159760..2160533(+) (spo0J) [Streptococcus porcinus strain NCTC10710]
ATGACAGAAGAATTAAAAGAAATAAAAATAGAAGATATTGTTGCTAATCCTTATCAACCTAGACTTCACTTTAATCATGA
CGAACTAAAAGAATTAGCAAATTCTATTAAAATAAATGGACTTATCCAACCAATTATCGTCCGACCATCCGAAATTTATG
GCTATGAATTAATTGCGGGTGAAAGACGTTTAAAAGCTTCTCAACTAGCTGGTTTAGAAAAAGTTCCAGCAATCATAAAA
AATATTTCAACAACTGAAAGTATGCACCAAGCAATAGTTGAAAATCTTCAACGATCCGACTTAAATCCAATTGAAGAAGC
AAAGGCTTTTCAAACTATTCTTACTAAAAAACAATTAACTCATGAACAACTAGCTACTTTTATGGGCAAATCGCGTCCTT
ACATTACTAATAGTATCCGCCTTTTACAGTTACCTGATATTATTTTATCTGCACTAGAAGAGGGAAAAATTAGTACTGGG
CATGCCCGTAGTTTAGTTACTTTGAATAAGAGTCAGGATCAAGAAAACTATTTTCATCGTATTATCGACCAAGACCTCAG
CGTACGTCAGACTGAGCAGCTCGTAAAATTAAAAAAGCAAACTAAAAAGCCACAGATAGATAAGGATATTTTTATTAAAG
CCCTAGAAGAAGAGCTCGCAAAATCTCTAGGCCTTTCTATTCATATAAAACTAAAAAAAGATGGTAGTGGACAATTATCT
TGCCTCTTTCATGATGATGAAGAACTCAACAGAATTATCAACAAATTAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4V0A5J3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.588

100

0.576


Multiple sequence alignment