Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   FGL04_RS10635 Genome accession   NZ_LR594035
Coordinates   2066132..2067334 (+) Length   400 a.a.
NCBI ID   WP_007891607.1    Uniprot ID   -
Organism   Streptococcus pseudoporcinus strain NCTC5385     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2061132..2072334
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL04_RS10610 (NCTC5385_02294) - 2062342..2064927 (+) 2586 WP_138069134.1 YfhO family protein -
  FGL04_RS10630 (NCTC5385_02298) rlmH 2065456..2065935 (-) 480 WP_138069188.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  FGL04_RS10635 (NCTC5385_02299) htrA 2066132..2067334 (+) 1203 WP_007891607.1 S1C family serine protease Regulator
  FGL04_RS10640 (NCTC5385_02300) spo0J 2067411..2068184 (+) 774 WP_138069135.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 400 a.a.        Molecular weight: 42595.37 Da        Isoelectric Point: 6.7493

>NTDB_id=1127324 FGL04_RS10635 WP_007891607.1 2066132..2067334(+) (htrA) [Streptococcus pseudoporcinus strain NCTC5385]
MTIIKNISKLFGILVVGILGGVIAFFALSAFHPDFTNNQEGVAKPTTVSKVTYKNTTNTTKAVKVVQNAVVSVINYRKSD
SANQTYDIFGEARPSSKDDNGYSIYSEGSGVIYKKEGKEAYIVTNNHVIDKTDRIEILLADGSKVVGKLVGADTYSDLAV
VKVSSEKIKTIAKFANSANLNVGEVAIAIGSPLGTEYANSVTEGIVSSLSRTVTLKNDEGQTISTNAIQTDAAINPGNSG
GALINIEGQVIGINSSKISQSNASGNAVEGMGFAIPSNDVIKIINQLEAKGEVIRPAIGIRMVNLGDLSTNALNQLQVPE
DVKGGIVVASVIDNMPAVGKLKQYDIITEIDGEVVNTKSDLQSILYGHEINDDIKVTYYRGKEKKTTTIKLTKTTKDLKE

Nucleotide


Download         Length: 1203 bp        

>NTDB_id=1127324 FGL04_RS10635 WP_007891607.1 2066132..2067334(+) (htrA) [Streptococcus pseudoporcinus strain NCTC5385]
GTGACAATAATAAAAAATATTTCGAAACTATTTGGTATCTTGGTGGTTGGTATTCTTGGTGGTGTTATTGCTTTTTTCGC
ACTAAGTGCCTTTCACCCTGATTTTACTAATAATCAAGAGGGAGTTGCAAAACCCACAACAGTTAGTAAAGTGACTTATA
AAAATACGACTAATACTACAAAAGCTGTTAAAGTTGTTCAAAATGCTGTCGTTTCAGTCATTAATTATCGAAAATCTGAT
TCAGCTAATCAAACTTATGATATTTTTGGTGAAGCTAGACCTTCTTCAAAAGACGACAATGGTTACTCTATTTATAGTGA
AGGATCAGGGGTGATTTACAAAAAAGAAGGCAAAGAAGCCTATATTGTAACGAACAACCATGTTATTGACAAAACAGATA
GAATTGAAATTTTACTAGCCGATGGTTCAAAGGTAGTTGGTAAATTAGTAGGAGCTGACACATATTCTGATCTAGCAGTT
GTTAAAGTTTCTTCAGAAAAAATTAAGACAATTGCTAAATTTGCCAATTCTGCCAATTTAAACGTTGGTGAAGTGGCTAT
TGCTATTGGTAGTCCTTTAGGAACCGAGTATGCTAACTCTGTTACAGAAGGAATAGTATCAAGTTTAAGCAGAACAGTAA
CTCTTAAAAATGATGAAGGGCAGACCATTTCAACAAATGCTATTCAAACAGATGCAGCTATTAACCCAGGAAATTCTGGA
GGTGCTTTAATTAATATTGAAGGTCAGGTTATTGGAATTAATTCAAGTAAAATCTCACAATCTAACGCTTCTGGCAATGC
AGTTGAAGGAATGGGATTTGCAATTCCATCTAATGATGTTATTAAAATTATTAACCAGTTGGAAGCCAAGGGTGAGGTTA
TTCGACCAGCCATTGGAATTAGAATGGTAAACCTTGGTGATTTATCAACGAATGCTTTGAACCAACTTCAAGTACCAGAA
GATGTTAAAGGTGGTATTGTGGTTGCTTCAGTGATAGATAATATGCCTGCAGTTGGTAAACTAAAGCAATATGATATTAT
CACCGAAATTGATGGTGAAGTGGTGAATACAAAGTCTGATTTACAAAGTATACTTTACGGTCATGAGATAAATGATGACA
TTAAAGTTACTTACTATCGTGGTAAAGAAAAGAAAACAACCACTATCAAATTGACAAAAACAACAAAAGATTTAAAGGAA
TAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(296-391)

Trypsin-like peptidase domain (Trypsin_2)

(108-253)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

60.969

98

0.597
  htrA Streptococcus gordonii str. Challis substr. CH1

53.885

99.75

0.538
  htrA Streptococcus pneumoniae Rx1

53.015

99.5

0.527
  htrA Streptococcus pneumoniae TIGR4

53.015

99.5

0.527
  htrA Streptococcus pneumoniae D39

53.015

99.5

0.527
  htrA Streptococcus pneumoniae R6

53.015

99.5

0.527
  htrA Streptococcus mitis NCTC 12261

53.453

97.75

0.523

Multiple sequence alignment