Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   FGL04_RS07745 Genome accession   NZ_LR594035
Coordinates   1497125..1499107 (-) Length   660 a.a.
NCBI ID   WP_138068782.1    Uniprot ID   A0A4U9Z2I2
Organism   Streptococcus pseudoporcinus strain NCTC5385     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1492125..1504107
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL04_RS07720 (NCTC5385_01680) - 1492222..1492410 (-) 189 WP_000677078.1 hypothetical protein -
  FGL04_RS07725 (NCTC5385_01681) amiF 1492635..1493558 (-) 924 WP_138068779.1 ATP-binding cassette domain-containing protein Regulator
  FGL04_RS07730 (NCTC5385_01682) amiE 1493551..1494621 (-) 1071 WP_138068780.1 ABC transporter ATP-binding protein Regulator
  FGL04_RS07735 (NCTC5385_01683) amiD 1494630..1495556 (-) 927 WP_007893576.1 oligopeptide ABC transporter permease OppC Regulator
  FGL04_RS07740 (NCTC5385_01684) amiC 1495556..1497055 (-) 1500 WP_138068781.1 ABC transporter permease Regulator
  FGL04_RS07745 (NCTC5385_01685) amiA3 1497125..1499107 (-) 1983 WP_138068782.1 peptide ABC transporter substrate-binding protein Regulator
  FGL04_RS07750 (NCTC5385_01686) pbp3 1499432..1500670 (+) 1239 WP_138068783.1 D-alanyl-D-alanine carboxypeptidase PBP3 -
  FGL04_RS07755 (NCTC5385_01687) pbp3 1500717..1501931 (+) 1215 WP_138068784.1 D-alanyl-D-alanine carboxypeptidase PBP3 -
  FGL04_RS07760 (NCTC5385_01688) - 1502048..1503190 (+) 1143 WP_416236988.1 D-alanyl-D-alanine carboxypeptidase family protein -
  FGL04_RS11290 (NCTC5385_01689) - 1503375..1503935 (-) 561 WP_269902560.1 SdrD B-like domain-containing protein -

Sequence

Protein


Download         Length: 660 a.a.        Molecular weight: 73554.08 Da        Isoelectric Point: 7.1276

>NTDB_id=1127310 FGL04_RS07745 WP_138068782.1 1497125..1499107(-) (amiA3) [Streptococcus pseudoporcinus strain NCTC5385]
MKNGKWLAAIGIAILSVSTLAACSNGSGKDSKSKNYSYVYATDPDTLDYLVSGRSTTSEIIQNSVDGLMEYDNMGNLVPS
VAKSWTVSKDGLTYTYKIRKDSKWYTADGEEYANVTANDFVTGLKHAADKGSDALYLVQDSIKGLGDYVEGKTKDFSTVG
VKAIDKNTLQYTLNKPESFWNSKLTYGILSPVNADFLKSKGKDFGKASDPSSILYNGPFLISSLTSKSSIEFVKNENYWD
KKDVHVDGVQLTYYDGQDQESLFRNFDKGAYSAARLFPTTPSYKKVKKNYGDNIIYAPQKSNTYYATFNLNRTAYDHTKK
TSDKQKDDTRKAVLNKDFRQALTFGFNRKSYTAQTAGEDGAGKSLRNTLVPPAFVQIDGHDFGKTVEKELANYGEQWKDV
NLADAQDGLYNPEKAKKQMDKAKKALEAQGVQFPIHLDMPQDQTASGLMQQAQSMKQSIEKSLGKENVVIDIIELNTDTY
NNITYMAETTNQQDWDLSTASGWSPDYADPSSYLDIFNPTMASAQTKFIGLNPIKDVAIANEAGLEEFTRLDGDAGHITD
NQDERFKKYAQAQAALTDSAVYIPTYSLGGTPSITKVVPFTGVFGWSGNKYDASTFYKYMKLQDKPVTSKDYNKALKKWK
KDKEKSNEKYAESLEKHIEK

Nucleotide


Download         Length: 1983 bp        

>NTDB_id=1127310 FGL04_RS07745 WP_138068782.1 1497125..1499107(-) (amiA3) [Streptococcus pseudoporcinus strain NCTC5385]
ATGAAAAATGGCAAGTGGTTGGCTGCTATTGGGATAGCGATTTTATCAGTCTCTACCTTAGCAGCTTGTAGCAATGGATC
AGGCAAAGACAGTAAGTCAAAAAACTATAGTTACGTCTATGCAACAGATCCAGATACTTTAGATTATTTGGTTTCAGGTC
GTTCAACAACAAGTGAAATCATTCAAAATAGTGTCGATGGCTTAATGGAATATGATAACATGGGGAATTTGGTTCCCTCA
GTTGCTAAAAGCTGGACAGTATCTAAAGATGGCTTAACATACACCTATAAAATTCGTAAGGATTCAAAATGGTACACTGC
TGATGGTGAAGAGTATGCAAATGTTACAGCAAATGATTTTGTAACTGGTTTGAAACATGCTGCTGACAAGGGTTCAGATG
CTCTTTACCTTGTACAAGATTCTATAAAAGGTTTGGGAGATTACGTTGAAGGAAAAACAAAAGACTTCTCGACTGTAGGC
GTGAAAGCTATTGACAAAAATACTCTTCAATATACGCTTAATAAACCTGAAAGCTTCTGGAATTCAAAATTAACATATGG
GATTCTATCTCCTGTTAATGCTGACTTCTTAAAATCTAAAGGTAAGGATTTTGGTAAAGCATCAGATCCATCTTCTATCT
TATATAATGGGCCATTCTTGATTTCATCATTGACAAGCAAGTCATCTATTGAATTTGTCAAAAATGAAAATTATTGGGAT
AAAAAAGATGTGCATGTTGATGGTGTACAGTTAACCTATTATGATGGTCAAGATCAAGAATCACTATTTAGAAATTTTGA
TAAAGGTGCCTATTCTGCAGCACGTCTTTTCCCGACAACACCTTCTTATAAAAAAGTTAAGAAAAACTATGGCGACAATA
TTATCTATGCGCCACAAAAATCAAATACCTATTATGCTACATTTAATTTGAATCGCACAGCTTATGACCATACTAAAAAA
ACAAGTGATAAACAAAAAGATGATACCCGTAAGGCTGTTTTAAATAAAGATTTCCGTCAAGCATTAACATTTGGATTTAA
TAGAAAATCATATACTGCTCAGACTGCTGGTGAAGATGGAGCAGGTAAATCTCTTCGGAATACTCTAGTTCCACCTGCAT
TTGTTCAAATTGATGGTCACGATTTTGGCAAAACGGTTGAAAAAGAGCTAGCTAATTATGGGGAACAGTGGAAAGATGTT
AATCTTGCTGATGCGCAAGATGGCCTCTATAATCCAGAGAAAGCTAAAAAGCAAATGGACAAAGCTAAAAAAGCTTTGGA
AGCTCAAGGAGTACAATTCCCAATCCACCTTGATATGCCACAAGATCAAACTGCATCTGGCTTAATGCAACAAGCTCAAT
CAATGAAACAATCTATTGAAAAGTCTCTTGGGAAAGAAAACGTTGTGATTGATATTATTGAGCTCAATACTGATACATAT
AACAATATCACTTATATGGCTGAAACAACAAATCAACAAGACTGGGATCTCTCAACTGCCTCAGGTTGGAGCCCAGACTA
TGCAGATCCGTCTTCTTATCTTGATATATTCAACCCAACAATGGCAAGTGCTCAAACAAAATTCATTGGCCTTAATCCAA
TCAAAGACGTGGCTATTGCTAATGAGGCAGGTCTAGAAGAATTTACAAGACTAGATGGTGACGCAGGTCACATTACGGAT
AATCAGGATGAACGATTTAAAAAATATGCCCAAGCCCAAGCTGCTTTAACGGATTCAGCCGTTTATATTCCAACTTACTC
ACTAGGTGGAACCCCTTCAATCACTAAAGTGGTACCATTTACAGGAGTATTTGGCTGGTCTGGTAATAAATATGATGCAT
CTACATTTTATAAATATATGAAACTTCAAGATAAACCCGTAACGTCAAAAGATTATAATAAAGCTTTGAAAAAATGGAAA
AAAGATAAAGAAAAATCTAATGAAAAATATGCTGAGTCGCTAGAAAAGCATATTGAAAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(77-518)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U9Z2I2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMG 18311

54.091

100

0.541
  amiA3 Streptococcus thermophilus LMD-9

53.939

100

0.539
  amiA Streptococcus salivarius strain HSISS4

53.939

100

0.539

Multiple sequence alignment