Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Machinery gene
Locus tag   FGL10_RS06725 Genome accession   NZ_LR590477
Coordinates   1288469..1289965 (-) Length   498 a.a.
NCBI ID   WP_003709925.1    Uniprot ID   D0WAU4
Organism   Neisseria lactamica strain NCTC10617     
Function   ssDNA binding (predicted from homology)   
DNA processing

Genomic Context

Location: 1283469..1294965
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL10_RS06690 (NCTC10617_01165) - 1283699..1284847 (+) 1149 WP_036469992.1 class I SAM-dependent methyltransferase -
  FGL10_RS06705 (NCTC10617_01168) - 1285486..1285752 (-) 267 WP_118778675.1 hypothetical protein -
  FGL10_RS06710 (NCTC10617_01169) - 1285987..1286808 (-) 822 WP_003709929.1 undecaprenyl-diphosphate phosphatase -
  FGL10_RS06715 (NCTC10617_01170) dsbA1 1286842..1287486 (-) 645 WP_003709928.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  FGL10_RS06720 (NCTC10617_01171) ftsN 1287489..1288358 (-) 870 WP_171007432.1 cell division protein FtsN -
  FGL10_RS06725 (NCTC10617_01172) comM 1288469..1289965 (-) 1497 WP_003709925.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  FGL10_RS06730 (NCTC10617_01173) - 1289979..1290299 (-) 321 WP_003709924.1 accessory factor UbiK family protein -
  FGL10_RS06745 (NCTC10617_01174) putP 1290781..1292307 (+) 1527 WP_003709921.1 sodium/proline symporter PutP -

Sequence

Protein


Download         Length: 498 a.a.        Molecular weight: 53502.62 Da        Isoelectric Point: 7.0036

>NTDB_id=1126936 FGL10_RS06725 WP_003709925.1 1288469..1289965(-) (comM) [Neisseria lactamica strain NCTC10617]
MSLALVYSRALSGMNAPLVEVEAHLANGLPHFNIVGLPDTEVKESRDRVRAAIIQSGFEFPAKKITVNLAPADLPKESGR
FDLPIAIGILAASGQVAPEKLAEYEFAGELALSGLLRPVRGALAMAWQGMQAKRAFVLPEENAGQAAVMRGITVYGARSL
GEVAAHLNGIEPLAQTECQVPQMPSENAKLPDLADVKGQHTARLALEIAAAGGHSLLMMGPPGTGKSMLSQRLPGILPPL
TEDELVEVWALRSLLPNHQQQLDSNRPFRSPHHSASAAAMVGGGSDPRPGEISLAHHGVLFLDELPEFDRKVLEVLREPL
ENGEIHISRAARQAVYPAKFQLVAAMNPCPCGYLGHPVKPCRCTPESVARYRSKISGPLLDRIDLTIEVPSLSAAELMQQ
EAGESSANVLERVIAARDKQYARQGKVNAALSVGELETIARIQKEAQEALGGLLEKLSLSARSFHRIMRVARTLADLAGD
EEVGRSHVLKAIGFRRAL

Nucleotide


Download         Length: 1497 bp        

>NTDB_id=1126936 FGL10_RS06725 WP_003709925.1 1288469..1289965(-) (comM) [Neisseria lactamica strain NCTC10617]
ATGTCGCTCGCCTTGGTTTACAGCCGCGCCTTGAGCGGTATGAATGCGCCGTTGGTCGAAGTGGAAGCCCACCTTGCCAA
CGGTCTGCCGCATTTCAACATCGTCGGACTGCCCGATACGGAAGTCAAAGAAAGCCGCGACCGCGTCCGTGCCGCCATCA
TCCAAAGCGGCTTCGAGTTTCCCGCCAAAAAAATCACCGTCAATCTCGCCCCTGCCGATCTGCCCAAAGAGTCGGGGCGT
TTCGATTTGCCGATTGCAATCGGCATCCTTGCCGCATCGGGGCAGGTTGCGCCCGAAAAGCTGGCGGAATACGAGTTTGC
GGGGGAATTGGCACTGTCGGGGCTGTTGCGCCCCGTGCGCGGCGCGTTGGCGATGGCGTGGCAGGGTATGCAGGCAAAAC
GTGCATTTGTTTTGCCTGAAGAAAACGCAGGACAAGCCGCCGTGATGCGCGGCATTACCGTTTACGGCGCGCGCTCTTTG
GGCGAAGTCGCCGCCCATTTGAACGGCATCGAACCTTTGGCGCAAACCGAATGCCAAGTTCCTCAGATGCCGTCTGAAAA
CGCCAAACTGCCCGACCTTGCCGATGTCAAGGGCCAACACACTGCCCGCCTTGCTTTGGAAATCGCTGCCGCAGGCGGAC
ACAGCCTTTTGATGATGGGTCCGCCGGGAACGGGCAAGTCTATGCTCTCCCAACGGCTGCCCGGCATCCTGCCGCCGCTG
ACCGAAGACGAATTGGTCGAAGTGTGGGCATTGCGTTCGCTCCTGCCCAACCACCAACAACAACTCGACAGCAACCGTCC
TTTCCGCAGTCCGCATCACAGCGCCAGCGCGGCGGCTATGGTCGGAGGCGGTTCGGACCCGCGTCCGGGCGAGATTTCAT
TGGCGCATCACGGCGTTTTGTTTTTGGACGAATTGCCCGAGTTCGACCGCAAAGTTTTGGAAGTGTTGCGCGAACCTTTG
GAAAACGGCGAAATCCACATTTCCCGCGCGGCGCGCCAAGCCGTCTATCCCGCCAAATTCCAGCTTGTCGCCGCCATGAA
CCCGTGTCCGTGCGGTTATCTCGGGCATCCCGTCAAACCCTGCCGTTGCACGCCCGAAAGCGTCGCGCGTTACCGCAGCA
AAATTTCCGGCCCGCTGCTTGACCGCATCGATTTGACCATCGAAGTCCCCAGCCTGTCCGCCGCCGAACTGATGCAGCAG
GAAGCAGGGGAAAGCAGTGCAAACGTTTTGGAACGCGTCATCGCCGCCCGTGACAAACAATACGCACGGCAGGGCAAAGT
CAACGCCGCCTTGAGTGTCGGCGAACTCGAGACCATCGCACGCATCCAAAAAGAAGCGCAGGAAGCCTTGGGCGGATTGT
TGGAAAAACTCTCCCTCTCCGCCCGCAGCTTCCACCGCATCATGCGCGTGGCGCGTACGTTGGCGGATTTGGCAGGCGAC
GAAGAAGTCGGCAGAAGCCATGTTTTGAAAGCCATAGGTTTCCGCCGCGCTTTATGA

Domains

Predicted by InterproScan.

Magnesium chelatase, subunit ChlI (Mg_chelatase)

(192-396)

Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C)

(403-495)

Subunit ChlI of Mg-chelatase (ChlI)

(21-142)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB D0WAU4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Vibrio cholerae strain A1552

53.187

100

0.536
  comM Vibrio campbellii strain DS40M4

52.716

99.799

0.526
  comM Glaesserella parasuis strain SC1401

49.602

100

0.5
  comM Haemophilus influenzae Rd KW20

49.9

100

0.5
  comM Legionella pneumophila str. Paris

47.316

100

0.478
  comM Legionella pneumophila strain ERS1305867

47.316

100

0.478
  RA0C_RS07335 Riemerella anatipestifer ATCC 11845 = DSM 15868

43.141

100

0.436

Multiple sequence alignment