Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   FGL10_RS06715 Genome accession   NZ_LR590477
Coordinates   1286842..1287486 (-) Length   214 a.a.
NCBI ID   WP_003709928.1    Uniprot ID   E4ZBH0
Organism   Neisseria lactamica strain NCTC10617     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1281842..1292486
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL10_RS06680 (NCTC10617_01162) rsmH 1281939..1282898 (-) 960 WP_003709939.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  FGL10_RS06685 (NCTC10617_01163) mraZ 1282895..1283350 (-) 456 WP_003709938.1 division/cell wall cluster transcriptional repressor MraZ -
  FGL10_RS06690 (NCTC10617_01165) - 1283699..1284847 (+) 1149 WP_036469992.1 class I SAM-dependent methyltransferase -
  FGL10_RS06705 (NCTC10617_01168) - 1285486..1285752 (-) 267 WP_118778675.1 hypothetical protein -
  FGL10_RS06710 (NCTC10617_01169) - 1285987..1286808 (-) 822 WP_003709929.1 undecaprenyl-diphosphate phosphatase -
  FGL10_RS06715 (NCTC10617_01170) dsbA1 1286842..1287486 (-) 645 WP_003709928.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  FGL10_RS06720 (NCTC10617_01171) ftsN 1287489..1288358 (-) 870 WP_171007432.1 cell division protein FtsN -
  FGL10_RS06725 (NCTC10617_01172) comM 1288469..1289965 (-) 1497 WP_003709925.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  FGL10_RS06730 (NCTC10617_01173) - 1289979..1290299 (-) 321 WP_003709924.1 accessory factor UbiK family protein -
  FGL10_RS06745 (NCTC10617_01174) putP 1290781..1292307 (+) 1527 WP_003709921.1 sodium/proline symporter PutP -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 23814.80 Da        Isoelectric Point: 9.7107

>NTDB_id=1126935 FGL10_RS06715 WP_003709928.1 1286842..1287486(-) (dsbA1) [Neisseria lactamica strain NCTC10617]
MKLKHLLPLLLSAVLSAQAYALTEGEDYIVLDKPVPQQQSGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEH
VVWRPEMLGLARMAAAVNLSGLKYQANPAVFKAVYEQKVHLEDRAVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQK
LTEQYGIDSTPTVIVGGKYRVIFNNGFDGGIHTIKELLAKVRAERKLSNHPVQK

Nucleotide


Download         Length: 645 bp        

>NTDB_id=1126935 FGL10_RS06715 WP_003709928.1 1286842..1287486(-) (dsbA1) [Neisseria lactamica strain NCTC10617]
ATGAAGCTCAAACATCTGTTGCCGCTGCTGCTGTCGGCAGTGTTGTCCGCACAGGCATATGCCCTGACGGAAGGGGAAGA
CTATATTGTTTTGGATAAGCCTGTCCCGCAGCAACAATCGGGAAAAATCGAAGTTTTGGAATTTTTCGGCTATTTTTGCG
TACATTGCCATCATTTCGACCCCTTGTTATTGAAGCTGGGCAAGGCATTGCCGTCTGATGCCTATTTGAGGACGGAACAC
GTGGTTTGGCGGCCTGAAATGCTCGGATTGGCCAGAATGGCGGCCGCCGTCAATTTGTCAGGTTTGAAATATCAGGCAAA
CCCTGCCGTGTTTAAAGCAGTTTACGAACAGAAGGTTCATTTGGAAGACAGGGCGGTGGCCGGAAAATGGGCTTTGTCGC
AAAAAGGCTTTGACGGCAAAAAACTGATGCGCGCCTATGATTCCCCCGAAGCTGCCGCCGCCGCATTAAAAATGCAGAAA
CTGACGGAACAATATGGTATTGACAGCACACCAACCGTTATTGTCGGTGGGAAATACCGCGTCATCTTCAATAATGGCTT
TGATGGCGGAATCCATACCATTAAAGAATTGCTTGCCAAAGTCAGGGCGGAGCGCAAACTGTCAAACCATCCTGTGCAAA
AATAA

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(42-179)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB E4ZBH0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

55.08

87.383

0.481
  dsbA2 Neisseria meningitidis MC58

50.811

86.449

0.439

Multiple sequence alignment