Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | EL220_RS04340 | Genome accession | NZ_LR134388 |
| Coordinates | 982780..983379 (+) | Length | 199 a.a. |
| NCBI ID | WP_027270598.1 | Uniprot ID | A0A0W0YBD6 |
| Organism | Legionella sainthelensi strain NCTC11988 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 977780..988379
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL220_RS04325 (NCTC11988_00902) | - | 979490..980914 (-) | 1425 | WP_027270595.1 | hypothetical protein | - |
| EL220_RS04330 (NCTC11988_00903) | pilM | 981151..982215 (+) | 1065 | WP_027270596.1 | type IV pilus assembly protein PilM | Machinery gene |
| EL220_RS04335 (NCTC11988_00904) | pilN | 982220..982783 (+) | 564 | WP_027270597.1 | PilN domain-containing protein | Machinery gene |
| EL220_RS04340 (NCTC11988_00905) | pilO | 982780..983379 (+) | 600 | WP_027270598.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| EL220_RS04345 (NCTC11988_00906) | pilP | 983376..983882 (+) | 507 | WP_027270599.1 | pilus assembly protein PilP | Machinery gene |
| EL220_RS04350 (NCTC11988_00907) | pilQ | 983891..985996 (+) | 2106 | WP_027270600.1 | type IV pilus secretin PilQ | Machinery gene |
| EL220_RS04355 (NCTC11988_00908) | aroK | 986320..986847 (+) | 528 | WP_003632469.1 | shikimate kinase AroK | - |
| EL220_RS04360 (NCTC11988_00909) | aroB | 986834..987937 (+) | 1104 | WP_027270602.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22712.41 Da Isoelectric Point: 5.3105
>NTDB_id=1122612 EL220_RS04340 WP_027270598.1 982780..983379(+) (pilO) [Legionella sainthelensi strain NCTC11988]
MNGINLSELTLENVGQWPLVVKIGMLLGTSLLIIALGYWLIIQDNFTQFDTLKQQETTLKADFENKQRQLYNLPAYRAQL
KTLADRFALVLTQLPEKNEMPGLLEEISKTGVASGLRFELFAPQPEVVHDFYIELPIKISVVGTYFQLAMFISRVAEMTR
IVTLHDFSIEGVSSKDHKVISEDELVMNITAKIYRYRAQ
MNGINLSELTLENVGQWPLVVKIGMLLGTSLLIIALGYWLIIQDNFTQFDTLKQQETTLKADFENKQRQLYNLPAYRAQL
KTLADRFALVLTQLPEKNEMPGLLEEISKTGVASGLRFELFAPQPEVVHDFYIELPIKISVVGTYFQLAMFISRVAEMTR
IVTLHDFSIEGVSSKDHKVISEDELVMNITAKIYRYRAQ
Nucleotide
Download Length: 600 bp
>NTDB_id=1122612 EL220_RS04340 WP_027270598.1 982780..983379(+) (pilO) [Legionella sainthelensi strain NCTC11988]
ATGAACGGTATTAATCTTAGTGAATTAACCTTGGAAAATGTAGGACAATGGCCACTAGTAGTAAAAATTGGAATGCTTTT
AGGTACGAGCTTATTAATTATCGCATTGGGATATTGGCTTATTATTCAAGATAATTTTACTCAGTTTGATACACTAAAAC
AGCAAGAAACAACTTTAAAAGCAGATTTTGAAAACAAACAACGTCAGCTGTATAATTTACCGGCTTATCGTGCCCAATTA
AAGACGTTGGCTGACCGCTTTGCTTTGGTGCTTACGCAGCTCCCTGAAAAAAATGAAATGCCTGGTTTACTTGAAGAAAT
TTCCAAGACAGGAGTCGCATCAGGTTTAAGGTTTGAGTTATTTGCTCCTCAACCAGAGGTAGTTCATGATTTTTATATAG
AATTACCAATAAAAATTTCAGTAGTAGGGACTTATTTTCAATTAGCAATGTTTATAAGTCGAGTGGCTGAAATGACAAGA
ATTGTTACCTTACATGATTTTAGTATTGAAGGAGTATCTTCTAAAGATCATAAGGTTATTTCAGAGGATGAATTGGTGAT
GAATATTACCGCAAAAATATATCGATATCGCGCACAATGA
ATGAACGGTATTAATCTTAGTGAATTAACCTTGGAAAATGTAGGACAATGGCCACTAGTAGTAAAAATTGGAATGCTTTT
AGGTACGAGCTTATTAATTATCGCATTGGGATATTGGCTTATTATTCAAGATAATTTTACTCAGTTTGATACACTAAAAC
AGCAAGAAACAACTTTAAAAGCAGATTTTGAAAACAAACAACGTCAGCTGTATAATTTACCGGCTTATCGTGCCCAATTA
AAGACGTTGGCTGACCGCTTTGCTTTGGTGCTTACGCAGCTCCCTGAAAAAAATGAAATGCCTGGTTTACTTGAAGAAAT
TTCCAAGACAGGAGTCGCATCAGGTTTAAGGTTTGAGTTATTTGCTCCTCAACCAGAGGTAGTTCATGATTTTTATATAG
AATTACCAATAAAAATTTCAGTAGTAGGGACTTATTTTCAATTAGCAATGTTTATAAGTCGAGTGGCTGAAATGACAAGA
ATTGTTACCTTACATGATTTTAGTATTGAAGGAGTATCTTCTAAAGATCATAAGGTTATTTCAGAGGATGAATTGGTGAT
GAATATTACCGCAAAAATATATCGATATCGCGCACAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
70.352 |
100 |
0.704 |
| comO | Acinetobacter baylyi ADP1 |
42.021 |
94.472 |
0.397 |
| pilO | Acinetobacter baumannii D1279779 |
38.947 |
95.477 |
0.372 |