Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Machinery gene
Locus tag   EL162_RS04405 Genome accession   NZ_LR134343
Coordinates   949741..951249 (+) Length   502 a.a.
NCBI ID   WP_126330365.1    Uniprot ID   A0A448GW53
Organism   Moraxella cuniculi strain NCTC10297     
Function   DNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 944741..956249
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL162_RS04390 (NCTC10297_00902) - 945133..945765 (+) 633 WP_126330361.1 hypothetical protein -
  EL162_RS04395 - 945790..946242 (-) 453 Protein_860 transposase -
  EL162_RS04400 (NCTC10297_00903) rapA 946685..949549 (+) 2865 WP_126330363.1 RNA polymerase-associated protein RapA -
  EL162_RS04405 (NCTC10297_00904) comM 949741..951249 (+) 1509 WP_126330365.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  EL162_RS04410 (NCTC10297_00905) - 951407..951952 (-) 546 WP_126330367.1 GNAT family N-acetyltransferase -
  EL162_RS04415 (NCTC10297_00906) hutU 952332..954059 (+) 1728 WP_126330369.1 urocanate hydratase -
  EL162_RS04420 (NCTC10297_00907) - 954268..955581 (+) 1314 WP_126330371.1 YjiH family protein -

Sequence

Protein


Download         Length: 502 a.a.        Molecular weight: 53598.63 Da        Isoelectric Point: 8.0299

>NTDB_id=1122082 EL162_RS04405 WP_126330365.1 949741..951249(+) (comM) [Moraxella cuniculi strain NCTC10297]
MSFAKVYTRSVVGLHAPQVLVEVHLSQGLPALTIVGLPEASVRESKDRVRSALINSGFEFPNRRLTINLAPADLPKDGAR
LDLPIAMGILAASGQIDESVLAAYEFVGELALNGELRPVTGALSVARAVKSAKDGKRTLIVPTTNAEEAVKAGGVTVLAA
QSLEAVCRHLEVVSGVSSNQADLLPAATAAVHNLAVEYALDLADVKGQHHARRALEVAAAGGHSLLFMGPPGSGKTLMAS
RLPSILPPLAEEEALEVASIYSIAGVECRFGERPFRAIHHTVSAAALVGGGSRPKPGEISLAHRGVVFMDELPEFDRRTL
ETLRQPIESKQIVISRANSQVSFPADFQLIAAMNPCPCGYYGDLSGRCHCRAEQVKKYQDKISGPLLDRIDLHIKVPAMP
INELQNAPAGEASSVVRERVVAARQIAIARQGKANYELSPSQLDQVVVLGTAEQQMLQLAQSRLNLSARSYHRILKVART
IADLAASDKVTTVHLAEALSYR

Nucleotide


Download         Length: 1509 bp        

>NTDB_id=1122082 EL162_RS04405 WP_126330365.1 949741..951249(+) (comM) [Moraxella cuniculi strain NCTC10297]
ATGTCATTTGCCAAAGTATATACCCGTTCGGTGGTTGGTCTGCACGCACCACAGGTGCTTGTTGAGGTGCATTTATCACA
AGGGCTGCCTGCCTTGACCATTGTTGGATTGCCTGAGGCTTCGGTGCGAGAGAGCAAGGATCGTGTGCGTTCGGCACTGA
TTAATTCAGGCTTTGAATTTCCCAATCGCCGTTTGACCATCAATCTTGCCCCTGCTGATTTGCCAAAAGATGGAGCTAGG
CTGGATTTGCCGATTGCCATGGGGATTTTGGCAGCAAGTGGTCAGATTGATGAGTCGGTGCTGGCAGCGTATGAGTTTGT
CGGTGAGTTGGCACTAAATGGCGAGCTGCGACCTGTTACTGGGGCGTTGTCTGTGGCTCGTGCAGTCAAATCCGCCAAAG
ATGGCAAACGCACACTGATTGTCCCAACCACCAATGCCGAAGAGGCAGTCAAGGCAGGCGGCGTTACCGTGTTGGCGGCA
CAGTCGCTTGAGGCGGTTTGTCGCCATCTGGAGGTGGTTAGCGGTGTCAGCAGTAATCAGGCGGATTTGTTGCCAGCTGC
TACCGCCGCTGTACATAATCTGGCGGTGGAATATGCACTTGATTTGGCGGATGTAAAAGGTCAGCATCATGCACGCCGAG
CGTTGGAGGTGGCAGCAGCAGGCGGGCATTCGTTATTATTTATGGGTCCGCCCGGTTCGGGTAAGACGCTGATGGCATCA
AGACTGCCAAGCATTCTACCACCACTGGCTGAAGAAGAGGCATTGGAGGTGGCGAGCATTTATTCCATCGCTGGGGTGGA
GTGTCGTTTTGGCGAGAGACCATTTCGTGCCATTCATCATACGGTATCGGCAGCGGCATTGGTTGGCGGTGGTTCGCGTC
CCAAACCCGGTGAGATTAGCCTTGCACATCGTGGCGTGGTGTTCATGGACGAATTGCCAGAGTTTGACCGCAGGACACTG
GAGACTTTGCGTCAGCCAATCGAATCCAAGCAGATCGTCATCTCGCGCGCCAATTCTCAAGTGTCTTTTCCTGCAGATTT
TCAGCTGATTGCAGCAATGAATCCTTGTCCTTGTGGTTATTATGGTGATTTATCAGGTCGCTGTCATTGCCGAGCTGAAC
AGGTGAAAAAATACCAAGATAAAATTTCAGGGCCGCTGCTTGATCGCATTGATTTGCATATCAAAGTTCCAGCCATGCCC
ATCAATGAGCTGCAAAATGCACCAGCAGGCGAGGCTTCGTCTGTTGTGCGTGAGCGAGTGGTGGCAGCACGACAAATTGC
CATCGCACGGCAGGGCAAGGCCAATTATGAGCTTAGCCCCAGTCAGCTTGATCAGGTGGTTGTGCTGGGTACTGCCGAGC
AACAAATGTTGCAGTTGGCACAGTCGAGACTTAATCTATCGGCACGCAGCTATCATCGTATCTTAAAGGTGGCACGCACC
ATTGCTGATTTGGCGGCCAGCGACAAGGTTACTACAGTGCATCTTGCCGAGGCATTAAGCTATCGCTGA

Domains

Predicted by InterproScan.

Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C)

(410-502)

Magnesium chelatase, subunit ChlI (Mg_chelatase)

(201-402)

Subunit ChlI of Mg-chelatase (ChlI)

(21-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A448GW53

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Legionella pneumophila strain ERS1305867

51.479

100

0.52
  comM Legionella pneumophila str. Paris

51.479

100

0.52
  comM Glaesserella parasuis strain SC1401

51.176

100

0.52
  comM Haemophilus influenzae Rd KW20

50.784

100

0.516
  comM Vibrio cholerae strain A1552

50.395

100

0.508
  comM Vibrio campbellii strain DS40M4

50

100

0.504
  RA0C_RS07335 Riemerella anatipestifer ATCC 11845 = DSM 15868

42.607

100

0.436

Multiple sequence alignment