Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   EL115_RS07395 Genome accession   NZ_LR134307
Coordinates   1478575..1480551 (-) Length   658 a.a.
NCBI ID   WP_003070579.1    Uniprot ID   A0A7G9AZL2
Organism   Streptococcus milleri strain NCTC10708     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1473575..1485551
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL115_RS07380 (NCTC10708_01471) amiD 1473614..1474540 (-) 927 WP_003070571.1 oligopeptide ABC transporter permease OppC Regulator
  EL115_RS07385 (NCTC10708_01472) amiC 1474540..1476036 (-) 1497 WP_003070574.1 ABC transporter permease Regulator
  EL115_RS07390 (NCTC10708_01473) amiA3 1476400..1478379 (-) 1980 WP_126441667.1 peptide ABC transporter substrate-binding protein Regulator
  EL115_RS07395 (NCTC10708_01474) amiA3 1478575..1480551 (-) 1977 WP_003070579.1 peptide ABC transporter substrate-binding protein Regulator
  EL115_RS07400 (NCTC10708_01475) - 1480710..1481399 (-) 690 WP_172594021.1 B3/4 domain-containing protein -
  EL115_RS07405 (NCTC10708_01476) - 1481562..1483172 (-) 1611 WP_126441669.1 CTP synthase -
  EL115_RS07410 (NCTC10708_01477) rpoE 1483416..1484003 (-) 588 WP_003070583.1 DNA-directed RNA polymerase subunit delta -
  EL115_RS07420 (NCTC10708_01478) tig 1484239..1485522 (-) 1284 WP_037597966.1 trigger factor -

Sequence

Protein


Download         Length: 658 a.a.        Molecular weight: 72338.89 Da        Isoelectric Point: 8.5876

>NTDB_id=1120906 EL115_RS07395 WP_003070579.1 1478575..1480551(-) (amiA3) [Streptococcus milleri strain NCTC10708]
MKKSKIIAVAGVALLTAGFLTACSGSKSNSAETKFGYVYSGDPETLDYVTSGKATTSDLVTNGVDGLLENDKYGNLVPSM
AKSWTVSKDGLTYTYKLRKGAKWYTSEGEEYAEVKAQDFVTGLKHAADKKSEALYLVQNSIKGLDAYVNGQTKDFSTVGV
KAVDDYTVQYTLNKPEPYWNSKTTSAIMWPINAEFLKSKGNKFGQSTDPNSILYNGPFLMKAITAKSAVEYVKNKHYWDK
DKVKVDSIKLAYYDGQDQDSLARNFKDGAYSYARLFPTSSNFATFEKQFKDNIYTAEAGSGTAALALNIDRQSYNHTAKK
TDEEKNSTKKALLNKDFRQALNFALDRESYAAQVNGKDGAATAIRNMFVPSNFVQVGEKSFSDVVEEKLASYGDDWKGVK
LADSQNGLYNPTKAKAKFAKAKEALQAQGVKFPIHLDVPVVETSKNYVARMQSLKQSVEKVLGKENVVMDLNMMSEDDFN
NVTYYAPNAAGEDWDISGAVGWSPDYQDPSTYLDILKSTASDNTKTWFGFDSGSENAGAKAVGLDEYNKLVDEAGAETTD
IAKRYEKYAAAQAWLTDSSLVLPTMASTGAGTFVSRIQPFSGAFAQTGSKGSSTYYKYIKVGKDAVTKKDYEAAKKKWQK
EKAESNKKAQDELADHVK

Nucleotide


Download         Length: 1977 bp        

>NTDB_id=1120906 EL115_RS07395 WP_003070579.1 1478575..1480551(-) (amiA3) [Streptococcus milleri strain NCTC10708]
ATGAAAAAAAGTAAAATTATTGCAGTAGCAGGGGTAGCCCTACTAACTGCTGGTTTTTTAACAGCTTGCTCGGGTTCGAA
ATCAAACTCGGCTGAAACAAAATTTGGTTATGTGTATTCTGGTGATCCAGAAACTTTGGATTATGTAACGTCAGGAAAAG
CAACCACTAGCGATCTTGTGACAAATGGAGTTGACGGATTGTTAGAAAATGACAAATATGGAAATCTTGTACCATCAATG
GCTAAGTCATGGACTGTATCAAAAGATGGTTTAACCTATACTTATAAACTTCGTAAGGGTGCCAAATGGTACACATCAGA
AGGTGAAGAATATGCTGAAGTCAAGGCGCAAGATTTTGTAACTGGACTGAAACATGCTGCCGATAAAAAATCTGAGGCGC
TTTATTTGGTTCAAAACTCAATTAAAGGTTTAGATGCTTACGTGAATGGTCAAACAAAAGACTTTTCAACGGTAGGTGTG
AAAGCGGTTGATGATTATACTGTTCAGTATACATTGAACAAGCCAGAACCATATTGGAATTCTAAGACAACCTCTGCCAT
TATGTGGCCAATCAATGCAGAATTTTTGAAATCTAAAGGAAATAAATTTGGCCAATCAACAGACCCTAACTCAATCCTTT
ATAATGGACCATTCTTGATGAAAGCTATCACAGCAAAATCTGCGGTAGAATATGTTAAAAACAAACATTATTGGGATAAA
GATAAAGTAAAAGTTGATAGCATTAAACTTGCTTACTATGATGGTCAAGACCAAGACTCATTGGCTCGTAATTTCAAAGA
TGGGGCATACTCATACGCACGCCTCTTCCCAACAAGTTCAAACTTTGCAACTTTTGAAAAACAATTCAAGGACAATATCT
ATACAGCAGAAGCAGGCTCTGGAACGGCTGCTTTAGCCCTTAATATTGACCGTCAATCTTACAACCATACGGCTAAGAAA
ACAGATGAAGAAAAAAATTCAACGAAAAAGGCATTGTTGAACAAAGACTTCCGTCAAGCTTTGAACTTTGCACTTGACCG
CGAATCTTATGCAGCACAAGTAAATGGTAAAGATGGTGCTGCCACAGCAATCCGTAATATGTTTGTACCATCTAATTTTG
TTCAAGTTGGTGAAAAATCATTTAGTGATGTTGTAGAAGAAAAATTAGCAAGCTATGGCGATGACTGGAAGGGTGTCAAA
CTAGCTGATTCACAAAATGGCTTGTACAATCCAACAAAAGCAAAAGCAAAATTTGCAAAAGCAAAAGAAGCTTTGCAAGC
TCAAGGTGTGAAATTCCCAATTCACTTAGACGTTCCTGTTGTAGAAACTTCTAAGAACTACGTTGCTCGGATGCAGTCTT
TAAAACAATCTGTTGAAAAAGTACTCGGCAAAGAAAATGTTGTCATGGACTTGAATATGATGTCAGAAGACGACTTTAAT
AACGTCACTTACTATGCTCCAAATGCAGCTGGAGAAGACTGGGATATTTCAGGTGCTGTTGGTTGGAGTCCTGATTATCA
AGATCCATCTACTTATCTTGATATTTTGAAATCAACGGCTTCTGACAATACGAAGACTTGGTTTGGTTTTGACTCTGGTA
GTGAAAATGCCGGTGCTAAAGCAGTTGGCTTGGACGAATATAATAAATTAGTCGATGAAGCAGGTGCAGAAACAACAGAT
ATTGCAAAACGCTATGAAAAATATGCAGCAGCACAAGCTTGGTTGACAGATAGCTCGCTTGTCTTGCCAACAATGGCTTC
AACAGGTGCCGGAACTTTTGTGTCACGCATTCAACCGTTCTCAGGTGCATTTGCGCAAACAGGTAGTAAAGGTAGCTCAA
CCTACTATAAATATATTAAAGTCGGTAAAGATGCTGTCACGAAGAAGGACTATGAAGCAGCTAAGAAGAAATGGCAAAAA
GAAAAAGCCGAGTCTAATAAAAAAGCTCAAGATGAATTAGCTGATCATGTAAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(76-522)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7G9AZL2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

64.036

100

0.641
  amiA3 Streptococcus thermophilus LMG 18311

63.885

100

0.64
  amiA Streptococcus salivarius strain HSISS4

62.918

100

0.629

Multiple sequence alignment