Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   EL084_RS08805 Genome accession   NZ_LR134292
Coordinates   1754000..1755259 (+) Length   419 a.a.
NCBI ID   WP_126440854.1    Uniprot ID   -
Organism   Streptococcus equinus strain NCTC10389     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1749000..1760259
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL084_RS08790 (NCTC10389_01846) - 1752108..1753040 (+) 933 WP_115254918.1 IS30 family transposase -
  EL084_RS08800 (NCTC10389_01848) rlmH 1753309..1753788 (-) 480 WP_004233682.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  EL084_RS08805 (NCTC10389_01849) htrA 1754000..1755259 (+) 1260 WP_126440854.1 S1C family serine protease Regulator
  EL084_RS08810 (NCTC10389_01850) spo0J 1755320..1756102 (+) 783 WP_115255564.1 ParB/RepB/Spo0J family partition protein Regulator
  EL084_RS08815 (NCTC10389_01851) dnaA 1756306..1757661 (+) 1356 WP_004233686.1 chromosomal replication initiator protein DnaA -
  EL084_RS08820 (NCTC10389_01852) dnaN 1757820..1758956 (+) 1137 WP_004233687.1 DNA polymerase III subunit beta -
  EL084_RS08825 - 1759087..1759236 (+) 150 WP_126440856.1 diacylglycerol kinase -
  EL084_RS08830 (NCTC10389_01853) - 1759267..1759971 (+) 705 WP_126440858.1 diacylglycerol/lipid kinase family protein -
  EL084_RS08835 (NCTC10389_01854) - 1759982..1760176 (+) 195 WP_004233691.1 DUF951 domain-containing protein -

Sequence

Protein


Download         Length: 419 a.a.        Molecular weight: 43553.42 Da        Isoelectric Point: 4.4181

>NTDB_id=1120468 EL084_RS08805 WP_126440854.1 1754000..1755259(+) (htrA) [Streptococcus equinus strain NCTC10389]
MKKVNFPKVKSKKILKPLSIILIGFIGGVAGTLLILNMAGISINNVSGSSTKTTTSKVSYSNSNDTTKAVSKVQDAVVSV
INYQSNTSSNDLYAQLFGDNANSNNSTSDDDLNISSEGSGVIYKKDGNSAYVVTNNHVVDGAEQLEIMLSDGTKVVGELV
GADTYSDIAVVKIASDKVSTVAEFADSDKITVGETAIAIGSPLGTEYANSVTQGIVSSLSRTVTMTNDDGETISTNAIQT
DAAINPGNSGGALINIEGQVIGINSSKISSTSSSSESVEGMGFAIPSNDVVKIINQLEENGKVIRPALGITMANLSDLST
VSISHLNIPTSVTGGVVVASVQSGMPAEGTLERYDVITAIDGEEVNSITDLQSILYGHSTGDSVKVTFYRGTTKKTETIK
LTKTTQDLSSSSDSSNQNQ

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=1120468 EL084_RS08805 WP_126440854.1 1754000..1755259(+) (htrA) [Streptococcus equinus strain NCTC10389]
ATGAAAAAAGTCAATTTTCCAAAAGTTAAATCAAAAAAAATTCTCAAGCCGCTGTCTATCATTTTAATCGGATTCATCGG
AGGTGTAGCTGGGACGCTACTGATTTTAAATATGGCTGGCATTTCGATAAATAACGTTAGCGGTTCAAGTACTAAAACAA
CCACAAGTAAAGTAAGTTATTCAAATTCTAATGATACGACAAAAGCGGTTTCAAAAGTTCAAGACGCTGTCGTATCCGTT
ATTAATTATCAATCAAATACTTCATCAAATGATCTGTACGCTCAATTATTTGGCGATAATGCAAATAGTAACAATTCAAC
ATCTGATGACGATTTAAACATATCTAGCGAAGGTTCTGGTGTTATTTACAAAAAAGACGGAAATTCTGCCTACGTTGTAA
CAAATAACCACGTCGTTGACGGCGCTGAACAGCTCGAAATCATGCTATCTGATGGTACAAAAGTCGTTGGAGAATTAGTC
GGAGCTGATACTTATTCAGATATAGCTGTTGTCAAAATTGCTTCTGATAAAGTTTCTACCGTTGCCGAATTTGCTGACTC
AGATAAAATTACTGTCGGGGAAACAGCTATTGCCATTGGTAGCCCACTTGGAACTGAATACGCAAACTCTGTAACACAAG
GGATTGTCTCAAGTCTAAGTCGTACAGTAACAATGACTAATGACGATGGCGAAACTATCTCAACAAATGCTATCCAAACC
GATGCTGCTATTAACCCAGGTAACTCTGGAGGTGCTTTGATTAATATCGAAGGACAAGTTATCGGTATCAACTCAAGTAA
AATTTCTTCTACATCTAGTTCAAGTGAGTCTGTAGAAGGTATGGGATTTGCCATTCCATCTAATGATGTTGTTAAAATCA
TCAATCAATTGGAAGAAAACGGAAAAGTTATTCGTCCAGCACTTGGTATCACAATGGCTAACTTAAGCGATCTCTCAACT
GTATCTATTAGCCACCTCAACATTCCAACTAGTGTTACTGGAGGAGTTGTTGTAGCCTCAGTACAATCAGGTATGCCTGC
TGAAGGAACTCTTGAAAGATACGATGTCATCACAGCTATTGATGGTGAAGAAGTTAACTCAATCACAGACCTTCAAAGTA
TCCTTTACGGACACTCAACTGGAGACTCTGTCAAAGTTACTTTCTACCGCGGTACAACTAAGAAAACTGAAACAATTAAA
TTAACTAAAACAACTCAAGATCTCTCTTCTTCATCAGATTCATCAAATCAAAATCAATAA

Domains

Predicted by InterproScan.

Trypsin-like peptidase domain (Trypsin_2)

(118-263)

PDZ domain (PDZ_2)

(306-401)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

63.614

96.42

0.613
  htrA Streptococcus gordonii str. Challis substr. CH1

60.599

95.704

0.58
  htrA Streptococcus mitis NCTC 12261

58.765

96.659

0.568
  htrA Streptococcus pneumoniae TIGR4

59.148

95.227

0.563
  htrA Streptococcus pneumoniae D39

59.148

95.227

0.563
  htrA Streptococcus pneumoniae Rx1

59.148

95.227

0.563
  htrA Streptococcus pneumoniae R6

59.148

95.227

0.563

Multiple sequence alignment