Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   EL084_RS08810 Genome accession   NZ_LR134292
Coordinates   1755320..1756102 (+) Length   260 a.a.
NCBI ID   WP_115255564.1    Uniprot ID   -
Organism   Streptococcus equinus strain NCTC10389     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1750320..1761102
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL084_RS08790 (NCTC10389_01846) - 1752108..1753040 (+) 933 WP_115254918.1 IS30 family transposase -
  EL084_RS08800 (NCTC10389_01848) rlmH 1753309..1753788 (-) 480 WP_004233682.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  EL084_RS08805 (NCTC10389_01849) htrA 1754000..1755259 (+) 1260 WP_126440854.1 S1C family serine protease Regulator
  EL084_RS08810 (NCTC10389_01850) spo0J 1755320..1756102 (+) 783 WP_115255564.1 ParB/RepB/Spo0J family partition protein Regulator
  EL084_RS08815 (NCTC10389_01851) dnaA 1756306..1757661 (+) 1356 WP_004233686.1 chromosomal replication initiator protein DnaA -
  EL084_RS08820 (NCTC10389_01852) dnaN 1757820..1758956 (+) 1137 WP_004233687.1 DNA polymerase III subunit beta -
  EL084_RS08825 - 1759087..1759236 (+) 150 WP_126440856.1 diacylglycerol kinase -
  EL084_RS08830 (NCTC10389_01853) - 1759267..1759971 (+) 705 WP_126440858.1 diacylglycerol/lipid kinase family protein -
  EL084_RS08835 (NCTC10389_01854) - 1759982..1760176 (+) 195 WP_004233691.1 DUF951 domain-containing protein -
  EL084_RS08840 (NCTC10389_01855) - 1760323..1760733 (+) 411 WP_126440860.1 hypothetical protein -
  EL084_RS09580 (NCTC10389_01856) - 1760748..1761101 (+) 354 WP_413081335.1 hypothetical protein -

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 29893.70 Da        Isoelectric Point: 10.2238

>NTDB_id=1120469 EL084_RS08810 WP_115255564.1 1755320..1756102(+) (spo0J) [Streptococcus equinus strain NCTC10389]
MTETLNLINIDDISPNPYQPRLEFKQEELEELSRSIKANGLIQPIIVRKSAIFGYELIAGERRLKASKMAGLSEIPAIIK
EISNKESMQLAIVENLQRSDLNPIEEAKAYQQLLDRNQMTHEELAQFMGKSRPYITNCLRLLNLPSAISKAVERGQLSQG
HARVLLTLKNKKEQEKWYQKVITEEISVRKLEELVKKSKPTKKSSKKNKKNIFIRHQEEELSKLLGVPVSLSLAKSGFKG
DLQLRFQSEEDFNRIINRLK

Nucleotide


Download         Length: 783 bp        

>NTDB_id=1120469 EL084_RS08810 WP_115255564.1 1755320..1756102(+) (spo0J) [Streptococcus equinus strain NCTC10389]
ATGACTGAGACACTTAACCTAATAAATATTGACGATATTTCTCCAAATCCTTACCAACCACGCTTAGAATTTAAACAAGA
AGAATTAGAAGAGCTATCTCGATCAATCAAAGCTAATGGCCTCATTCAGCCCATTATCGTTCGAAAATCTGCTATCTTTG
GATATGAACTTATAGCAGGAGAGAGACGTCTTAAAGCTTCTAAAATGGCTGGTTTGAGCGAAATTCCAGCGATTATCAAA
GAAATTTCTAATAAAGAAAGTATGCAACTGGCTATTGTCGAAAATTTGCAACGTTCAGACCTTAATCCCATCGAGGAAGC
AAAAGCCTATCAGCAGTTATTAGACAGAAATCAGATGACACACGAAGAATTAGCTCAATTCATGGGAAAATCTCGTCCTT
ACATCACCAATTGCTTACGATTATTGAATTTACCAAGTGCCATTTCTAAAGCTGTTGAGCGAGGGCAACTATCCCAAGGT
CACGCGCGCGTGCTTCTCACATTAAAAAATAAAAAAGAACAAGAGAAGTGGTATCAAAAAGTCATTACTGAAGAAATTAG
CGTCCGAAAACTGGAAGAACTGGTCAAAAAATCTAAACCCACTAAAAAATCTTCAAAAAAAAATAAAAAAAATATTTTTA
TTCGTCATCAAGAAGAAGAACTGTCAAAATTGTTAGGAGTCCCAGTTAGCTTATCCCTTGCTAAATCAGGCTTCAAGGGA
GATTTGCAATTGCGTTTTCAGAGCGAAGAAGACTTTAACAGAATTATCAACAGGCTAAAATAG

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(8-95)

HTH domain found in ParB protein (HTH_ParB)

(148-197)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

61.004

99.615

0.608

Multiple sequence alignment