Detailed information NTG1120173

Bioinformatically predicted

Overview

• Name: comB
• Type: Regulator
• Locus tag: EL100_RS03915
• Genome accession: NZ_LR134285
• Coordinates: 746817..748178 (+)
• Length: 453 a.a.
• NCBI ID: WP_126404998.1
• Uniprot ID: -
• Organism: Streptococcus australis strain NCTC3168
• Function: transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 741817..753178

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL100_RS03900 (NCTC3168_00806)	-	742875..743147 (+)	273	WP_006595358.1	Veg family protein	-
EL100_RS03905 (NCTC3168_00807)	rpsD	743742..744353 (+)	612	WP_003009175.1	30S ribosomal protein S4	-
EL100_RS03910 (NCTC3168_00808)	comA	744636..746789 (+)	2154	WP_126404999.1	peptide cleavage/export ABC transporter ComA	Regulator
EL100_RS03915 (NCTC3168_00809)	comB	746817..748178 (+)	1362	WP_126404998.1	bacteriocin secretion accessory protein	Regulator
EL100_RS03920 (NCTC3168_00810)	-	748490..749026 (-)	537	WP_126404997.1	TetR/AcrR family transcriptional regulator	-
EL100_RS03925 (NCTC3168_00811)	-	749162..751957 (+)	2796	WP_126404996.1	YhgE/Pip domain-containing protein	-
EL100_RS03930 (NCTC3168_00812)	-	752023..752691 (-)	669	WP_126404995.1	DUF4947 domain-containing protein	-

Sequence

Protein

• Length: 453 a.a.
• Molecular weight: 50850.36 Da
• Isoelectric Point: 6.1287

>NTDB_id=1120173 EL100_RS03915 WP_126404998.1 746817..748178(+) (comB) [Streptococcus australis strain NCTC3168]
MMNEKYFESAEFYQKRFHNFASLWVVPCFLLLLFIVGFSVFAKKEVTLSSRGTIEATRVVDQIQSTSNSPIQVNHLKENK
EIKKGEILVEYQEDQEKQQGMSLTQQLDLLKKQEEQLKLLKTSIETGESQFTGNEHFGYDQLFKDYQQQIAILQAQAHQQ
NATIASQNASASSSQAEIGQAIQDQEKRLADYRSLKSALLEERSLDATHPLYSLYQSYAQQPHGEENAQAQASFISQLDS
QIQQLEASISNYRIQYAGSGSQQAFSTSLDSQIASLKAQQLSKVGQDLLLLSQQIADLDSKLKTQETLLQKTRILAKDEG
VIHLNDETKGASIVAEGTPLAQVYPLIQKEKEVKIVTYIPSKDIATIHVGDRIRFSTQGSKQKPITLEARISSIASSATR
TEQGNFFKIEGVLRLKDYEAKLLRYGLEGKCVLITGEKSYFSFFVDQFLGAGN

Nucleotide

• Length: 1362 bp

>NTDB_id=1120173 EL100_RS03915 WP_126404998.1 746817..748178(+) (comB) [Streptococcus australis strain NCTC3168]
ATGATGAACGAAAAATATTTTGAAAGTGCAGAATTCTATCAGAAACGTTTCCATAATTTTGCTAGTTTGTGGGTAGTCCC
TTGTTTTCTTTTACTACTGTTTATTGTAGGCTTCTCTGTCTTTGCCAAGAAGGAAGTAACCTTGTCTAGTCGTGGGACGA
TTGAAGCTACGCGCGTGGTGGACCAAATCCAGTCAACGAGTAATTCTCCCATTCAAGTCAACCATTTGAAGGAAAATAAA
GAGATTAAGAAGGGCGAAATTTTGGTAGAATACCAGGAGGATCAGGAAAAACAACAAGGAATGAGCTTGACGCAACAGCT
AGATCTCTTGAAGAAACAGGAGGAACAATTAAAACTGTTGAAAACGAGCATTGAGACCGGGGAGAGTCAGTTTACAGGAA
ATGAGCATTTTGGGTATGATCAGCTGTTTAAGGATTACCAGCAACAGATAGCGATTCTCCAAGCGCAAGCCCATCAACAA
AATGCGACTATTGCTTCTCAAAATGCCAGTGCAAGTTCCAGTCAAGCAGAAATTGGCCAAGCTATCCAAGACCAGGAGAA
GCGATTAGCTGATTACCGTAGTCTAAAATCAGCTCTCCTAGAGGAAAGAAGTCTGGATGCGACTCATCCACTTTACTCCC
TCTACCAGAGTTACGCTCAGCAACCACATGGAGAAGAAAACGCTCAAGCACAAGCTTCTTTTATCAGTCAACTGGATAGT
CAAATCCAGCAGCTAGAAGCGAGTATTTCTAATTATCGAATTCAATATGCGGGATCCGGAAGTCAACAAGCTTTTTCGAC
CAGTTTAGATAGTCAAATAGCCTCGCTGAAAGCTCAACAGCTAAGTAAGGTTGGACAAGATCTGTTGCTTCTTTCTCAGC
AAATCGCAGATTTAGACAGTAAGTTAAAAACACAAGAAACTCTTCTTCAGAAGACTCGGATTCTAGCCAAGGATGAAGGG
GTAATTCATTTGAATGATGAAACAAAAGGAGCGAGTATTGTAGCAGAAGGCACTCCTTTGGCACAAGTTTATCCACTCAT
TCAGAAAGAAAAAGAAGTCAAGATTGTTACCTATATTCCTTCAAAAGATATAGCTACGATTCATGTGGGAGATCGGATTC
GCTTTAGCACGCAGGGAAGTAAACAAAAACCAATTACGCTAGAGGCCCGTATTAGCTCCATTGCTTCGAGTGCCACTCGG
ACAGAACAGGGGAATTTTTTCAAAATCGAGGGAGTTCTTCGTCTCAAGGATTATGAGGCAAAACTTCTACGGTACGGATT
GGAAGGGAAGTGTGTTCTGATCACAGGAGAAAAATCTTACTTTAGTTTCTTTGTGGATCAATTTTTAGGAGCGGGGAACT
AA

Domains

Predicted by InterproScan.

• HlyD family secretion protein (HlyD_3) (317-426)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comB	Streptococcus gordonii str. Challis substr. CH1	53.982	99.779	0.539
comB	Streptococcus pneumoniae Rx1	49.554	98.896	0.49
comB	Streptococcus pneumoniae D39	49.554	98.896	0.49
comB	Streptococcus mitis SK321	49.554	98.896	0.49
comB	Streptococcus pneumoniae R6	49.554	98.896	0.49
comB	Streptococcus mitis NCTC 12261	49.554	98.896	0.49
comB	Streptococcus pneumoniae TIGR4	48.884	98.896	0.483