Detailed information NTG1119870

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: EL076_RS01560
• Genome accession: NZ_LR134275
• Coordinates: 280758..281657 (+)
• Length: 299 a.a.
• NCBI ID: WP_048787930.1
• Uniprot ID: -
• Organism: Streptococcus vestibularis strain NCTC12167
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 275758..286657

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL076_RS01540 (NCTC12167_00304)	trkA	276936..278285 (-)	1350	WP_003098008.1	Trk system potassium transporter TrkA	-
EL076_RS01545 (NCTC12167_00306)	-	278573..279082 (+)	510	WP_003092259.1	tRNA (cytidine(34)-2'-O)-methyltransferase	-
EL076_RS01550 (NCTC12167_00308)	-	279392..279949 (+)	558	WP_037621581.1	ECF transporter S component	-
EL076_RS01555 (NCTC12167_00309)	-	279952..280602 (+)	651	WP_003092134.1	phosphatase PAP2 family protein	-
EL076_RS01560 (NCTC12167_00310)	comR	280758..281657 (+)	900	WP_048787930.1	helix-turn-helix transcriptional regulator	Regulator
EL076_RS01565 (NCTC12167_00311)	comA	281826..283922 (+)	2097	WP_126428985.1	peptide cleavage/export ABC transporter	Regulator
EL076_RS01570 (NCTC12167_00312)	-	284033..284365 (+)	333	WP_003092191.1	DUF805 domain-containing protein	-
EL076_RS10170 (NCTC12167_00313)	-	284417..284854 (-)	438	WP_316087744.1	DUF4153 domain-containing protein	-
EL076_RS10175 (NCTC12167_00314)	-	284939..285283 (-)	345	WP_225901316.1	urease cluster protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35054.39 Da
• Isoelectric Point: 5.1055

>NTDB_id=1119870 EL076_RS01560 WP_048787930.1 280758..281657(+) (comR) [Streptococcus vestibularis strain NCTC12167]
MSIKDSIGLRIKTERECQQMSREVLCLDGAELTVRQLIRIEKGESLPSLDKLSYIAKRLGKSMADLLDHDRIEIPDTYYE
MKNRLIKFPTYGDKERVKQKLDLIEDVYNQFFDILPEEELLTLDILENILSFTSWEERPKVEEIYEDLFEQVKRKKKFST
NDLLVIDYYFYHLYGRKQYDKKIFDRIVDRVLKQNIPTDDAYNIALFNDLMAIAGLKISLESFKDFLTVIDKLLAVIEKS
QFHSYKPGVYILEAKYELIHNGNKKKAAENYDKAIMFASVLEDSVLEEKTRAEKAADGL

Nucleotide

• Length: 900 bp

>NTDB_id=1119870 EL076_RS01560 WP_048787930.1 280758..281657(+) (comR) [Streptococcus vestibularis strain NCTC12167]
TTGAGCATAAAAGACAGCATTGGACTAAGAATCAAAACTGAGCGTGAATGCCAACAGATGTCACGTGAAGTGCTATGTTT
AGATGGTGCGGAATTGACTGTTCGCCAGTTAATTCGTATTGAAAAAGGAGAGTCTCTCCCTTCTTTGGATAAATTATCCT
ACATAGCAAAACGTCTGGGAAAAAGCATGGCTGACTTATTGGACCATGACAGGATTGAAATTCCTGACACTTACTATGAG
ATGAAAAATCGTTTAATAAAGTTCCCAACGTACGGAGATAAGGAGAGAGTTAAACAGAAGTTGGATCTTATTGAAGATGT
GTATAATCAATTCTTTGATATTCTTCCAGAAGAGGAACTATTGACTCTAGATATTCTCGAAAATATATTGAGTTTTACCA
GTTGGGAGGAGAGACCTAAAGTCGAAGAAATCTATGAAGATTTGTTTGAACAAGTTAAAAGAAAGAAGAAGTTTTCAACT
AATGATTTGCTAGTTATTGATTATTATTTCTATCATCTTTATGGGAGAAAGCAGTATGATAAAAAGATTTTTGACAGAAT
AGTAGATAGAGTATTAAAGCAAAACATCCCAACAGATGATGCTTATAATATTGCCTTATTTAATGATTTGATGGCTATAG
CTGGGTTAAAGATTTCTCTTGAGTCCTTTAAAGATTTCTTAACAGTAATAGATAAACTATTAGCTGTCATAGAAAAATCA
CAGTTTCATAGTTATAAACCAGGTGTCTATATTTTAGAAGCTAAGTATGAGCTTATACATAATGGGAACAAGAAAAAAGC
TGCTGAAAACTATGATAAAGCTATAATGTTTGCGTCGGTTTTAGAAGATTCCGTTTTGGAAGAAAAGACTCGAGCAGAGA
AAGCGGCAGATGGTTTGTAA

Domains

Predicted by InterproScan.

• ComR tetratricopeptide (ComR_TPR) (75-293)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus salivarius SK126	84.615	100	0.846
comR	Streptococcus salivarius strain HSISS4	83.612	100	0.836
comR	Streptococcus thermophilus LMG 18311	82.274	100	0.823
comR	Streptococcus thermophilus LMD-9	81.605	100	0.816
comR/comR2	Streptococcus sobrinus strain NIDR 6715-7	43.144	100	0.431
comR/comR1	Streptococcus sobrinus strain NIDR 6715-7	42.475	100	0.425