Detailed information NTG1119737

Bioinformatically predicted

Overview

• Name: comYF
• Type: Machinery gene
• Locus tag: EL077_RS00715
• Genome accession: NZ_LR134273
• Coordinates: 120934..121368 (+)
• Length: 144 a.a.
• NCBI ID: WP_012677237.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. equi strain NCTC12091
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 115934..126368

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL077_RS00685	-	117241..117912 (+)	672	Protein_101	ATP-binding cassette domain-containing protein	-
EL077_RS00690 (NCTC12091_00138)	comGA/cglA	118068..119006 (+)	939	WP_126436208.1	competence type IV pilus ATPase ComGA	Machinery gene
EL077_RS00695 (NCTC12091_00139)	comYB	118939..119973 (+)	1035	WP_337660760.1	competence type IV pilus assembly protein ComGB	Machinery gene
EL077_RS00700 (NCTC12091_00140)	comGC/cglC	119974..120297 (+)	324	WP_014622142.1	competence type IV pilus major pilin ComGC	Machinery gene
EL077_RS00705 (NCTC12091_00141)	comGD	120275..120700 (+)	426	WP_012514783.1	competence type IV pilus minor pilin ComGD	-
EL077_RS00710 (NCTC12091_00142)	comGE	120705..120947 (+)	243	WP_012677236.1	competence type IV pilus minor pilin ComGE	-
EL077_RS00715 (NCTC12091_00143)	comYF	120934..121368 (+)	435	WP_012677237.1	competence type IV pilus minor pilin ComGF	Machinery gene
EL077_RS00720 (NCTC12091_00144)	comGG	121346..121708 (+)	363	WP_037580629.1	competence type IV pilus minor pilin ComGG	-
EL077_RS00725 (NCTC12091_00145)	comYH	121770..122723 (+)	954	WP_037580627.1	class I SAM-dependent methyltransferase	Machinery gene
EL077_RS00730 (NCTC12091_00146)	-	122783..123985 (+)	1203	WP_126436211.1	acetate kinase	-
EL077_RS09825 (NCTC12091_00147)	-	124354..124725 (-)	372	WP_337660761.1	hypothetical protein	-
EL077_RS09830 (NCTC12091_00148)	-	124729..124968 (-)	240	WP_337660762.1	hypothetical protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16155.70 Da
• Isoelectric Point: 10.1988

>NTDB_id=1119737 EL077_RS00715 WP_012677237.1 120934..121368(+) (comYF) [Streptococcus equi subsp. equi strain NCTC12091]
MKDSRLKAFTLIECLIALLVISGSLLVYQALTKSLMVSERYLAANDQDNWLLFSQQLRAELSGTTLQGVSNNRLYVEKDK
KTLSFGQVKSHDFRKAAGNGRGYQPMLFGLSSSQITAVGQQVIIKLKWQSGLERTFIYAFQEKG

Nucleotide

• Length: 435 bp

>NTDB_id=1119737 EL077_RS00715 WP_012677237.1 120934..121368(+) (comYF) [Streptococcus equi subsp. equi strain NCTC12091]
TTGAAAGACAGTAGGTTAAAGGCTTTCACCTTGATAGAGTGCCTTATTGCCTTGCTTGTCATCTCAGGCTCTTTATTAGT
TTATCAGGCCTTAACCAAGAGCCTTATGGTGAGTGAGAGGTATCTAGCAGCAAATGATCAGGACAACTGGCTTTTGTTTT
CCCAGCAATTGCGAGCAGAGCTTTCAGGTACTACCTTACAGGGTGTCTCCAATAATAGGCTATATGTTGAGAAAGACAAG
AAAACTCTGTCCTTTGGACAGGTCAAAAGCCATGATTTTAGAAAAGCAGCTGGCAATGGTCGAGGCTATCAGCCCATGCT
GTTTGGCTTGTCAAGTAGCCAAATAACAGCAGTAGGTCAGCAGGTTATCATCAAGCTGAAATGGCAAAGCGGCTTAGAAA
GGACCTTTATTTATGCATTTCAAGAGAAGGGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (41-133)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYF	Streptococcus mutans UA140	52.083	100	0.521
comYF	Streptococcus mutans UA159	51.389	100	0.514
comGF/cglF	Streptococcus mitis SK321	50.365	95.139	0.479
comGF/cglF	Streptococcus mitis NCTC 12261	49.635	95.139	0.472
comGF	Lactococcus lactis subsp. cremoris KW2	47.143	97.222	0.458
comGF/cglF	Streptococcus pneumoniae D39	48.175	95.139	0.458
comGF/cglF	Streptococcus pneumoniae R6	48.175	95.139	0.458
comGF/cglF	Streptococcus pneumoniae TIGR4	48.175	95.139	0.458
comGF/cglF	Streptococcus pneumoniae Rx1	48.175	95.139	0.458