Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | EL077_RS00725 | Genome accession | NZ_LR134273 |
| Coordinates | 121770..122723 (+) | Length | 317 a.a. |
| NCBI ID | WP_037580627.1 | Uniprot ID | A0A922NTZ6 |
| Organism | Streptococcus equi subsp. equi strain NCTC12091 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 116770..127723
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL077_RS00685 | - | 117241..117912 (+) | 672 | Protein_101 | ATP-binding cassette domain-containing protein | - |
| EL077_RS00690 (NCTC12091_00138) | comGA/cglA | 118068..119006 (+) | 939 | WP_126436208.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| EL077_RS00695 (NCTC12091_00139) | comYB | 118939..119973 (+) | 1035 | WP_337660760.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| EL077_RS00700 (NCTC12091_00140) | comGC/cglC | 119974..120297 (+) | 324 | WP_014622142.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| EL077_RS00705 (NCTC12091_00141) | comGD | 120275..120700 (+) | 426 | WP_012514783.1 | competence type IV pilus minor pilin ComGD | - |
| EL077_RS00710 (NCTC12091_00142) | comGE | 120705..120947 (+) | 243 | WP_012677236.1 | competence type IV pilus minor pilin ComGE | - |
| EL077_RS00715 (NCTC12091_00143) | comYF | 120934..121368 (+) | 435 | WP_012677237.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| EL077_RS00720 (NCTC12091_00144) | comGG | 121346..121708 (+) | 363 | WP_037580629.1 | competence type IV pilus minor pilin ComGG | - |
| EL077_RS00725 (NCTC12091_00145) | comYH | 121770..122723 (+) | 954 | WP_037580627.1 | class I SAM-dependent methyltransferase | Machinery gene |
| EL077_RS00730 (NCTC12091_00146) | - | 122783..123985 (+) | 1203 | WP_126436211.1 | acetate kinase | - |
| EL077_RS09825 (NCTC12091_00147) | - | 124354..124725 (-) | 372 | WP_337660761.1 | hypothetical protein | - |
| EL077_RS09830 (NCTC12091_00148) | - | 124729..124968 (-) | 240 | WP_337660762.1 | hypothetical protein | - |
| EL077_RS00740 (NCTC12091_00149) | - | 125491..127533 (+) | 2043 | WP_111692100.1 | BglG family transcription antiterminator | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35741.74 Da Isoelectric Point: 4.8471
>NTDB_id=1119738 EL077_RS00725 WP_037580627.1 121770..122723(+) (comYH) [Streptococcus equi subsp. equi strain NCTC12091]
MNFEKIEQAYELILENSQLIENDLKTHIYDAIVEQNSFYLGAQGASPQVAKNIETLKALQLTKEEWRQAYQFVLIKAGKT
EPLQANHQFTPDAIGFIMLYILETLSSQESLDVLEIGSGTGNLAHTILNHSHQAIHYLGIELDDLLIDLSASIAEIMGSS
AQFIQEDAVRPQLLKESDMIISDLPVGFYPNDDIASRYQVASSDEHTYAHHLLMEQALKYLKKDGFAIFLAPVNLLSSPQ
SHLLKQWLKGYAQVAALITLPEAVFGNPANAKSIIVLCKQSNRFAETFVYPIRDLKSVDNVRDFMENFKNWKRDNVI
MNFEKIEQAYELILENSQLIENDLKTHIYDAIVEQNSFYLGAQGASPQVAKNIETLKALQLTKEEWRQAYQFVLIKAGKT
EPLQANHQFTPDAIGFIMLYILETLSSQESLDVLEIGSGTGNLAHTILNHSHQAIHYLGIELDDLLIDLSASIAEIMGSS
AQFIQEDAVRPQLLKESDMIISDLPVGFYPNDDIASRYQVASSDEHTYAHHLLMEQALKYLKKDGFAIFLAPVNLLSSPQ
SHLLKQWLKGYAQVAALITLPEAVFGNPANAKSIIVLCKQSNRFAETFVYPIRDLKSVDNVRDFMENFKNWKRDNVI
Nucleotide
Download Length: 954 bp
>NTDB_id=1119738 EL077_RS00725 WP_037580627.1 121770..122723(+) (comYH) [Streptococcus equi subsp. equi strain NCTC12091]
ATGAATTTTGAAAAGATTGAACAAGCCTATGAGCTTATATTAGAAAATAGCCAGCTGATTGAAAATGATCTAAAAACGCA
TATCTATGATGCTATTGTTGAGCAGAATTCTTTTTATCTGGGAGCCCAAGGAGCAAGTCCTCAGGTTGCTAAAAATATTG
AGACGTTGAAGGCCTTGCAGTTAACCAAGGAGGAGTGGCGCCAGGCTTATCAGTTTGTTTTGATCAAGGCTGGGAAAACA
GAGCCATTACAGGCCAACCACCAATTTACCCCAGACGCGATCGGCTTTATCATGCTTTATATTTTGGAGACCTTGAGCTC
ACAAGAGTCACTTGATGTGCTTGAGATTGGCAGTGGGACAGGCAATCTGGCTCACACCATTTTAAACCATTCACACCAAG
CGATTCATTATTTAGGCATTGAGCTTGATGATTTATTAATTGATCTATCAGCTAGTATTGCTGAAATCATGGGGTCGTCA
GCCCAGTTTATTCAAGAGGATGCTGTCAGACCTCAGCTGTTAAAAGAAAGTGATATGATCATTAGTGATTTGCCAGTTGG
CTTTTATCCTAACGATGATATTGCCAGCAGGTATCAGGTGGCTAGCTCAGATGAGCATACCTATGCCCATCATTTACTGA
TGGAGCAGGCCTTAAAGTACCTGAAAAAAGATGGTTTTGCTATTTTCTTAGCACCGGTAAATCTTTTGAGCAGCCCACAA
AGTCACCTCTTAAAACAATGGCTGAAGGGCTATGCTCAGGTTGCGGCCTTGATTACTTTGCCTGAGGCTGTGTTTGGAAA
TCCAGCTAATGCAAAATCGATTATTGTTCTTTGTAAGCAATCGAATCGCTTTGCAGAAACCTTTGTTTACCCCATTAGGG
ATTTGAAATCTGTTGATAATGTTCGTGATTTTATGGAAAACTTCAAAAATTGGAAACGGGATAATGTTATTTAA
ATGAATTTTGAAAAGATTGAACAAGCCTATGAGCTTATATTAGAAAATAGCCAGCTGATTGAAAATGATCTAAAAACGCA
TATCTATGATGCTATTGTTGAGCAGAATTCTTTTTATCTGGGAGCCCAAGGAGCAAGTCCTCAGGTTGCTAAAAATATTG
AGACGTTGAAGGCCTTGCAGTTAACCAAGGAGGAGTGGCGCCAGGCTTATCAGTTTGTTTTGATCAAGGCTGGGAAAACA
GAGCCATTACAGGCCAACCACCAATTTACCCCAGACGCGATCGGCTTTATCATGCTTTATATTTTGGAGACCTTGAGCTC
ACAAGAGTCACTTGATGTGCTTGAGATTGGCAGTGGGACAGGCAATCTGGCTCACACCATTTTAAACCATTCACACCAAG
CGATTCATTATTTAGGCATTGAGCTTGATGATTTATTAATTGATCTATCAGCTAGTATTGCTGAAATCATGGGGTCGTCA
GCCCAGTTTATTCAAGAGGATGCTGTCAGACCTCAGCTGTTAAAAGAAAGTGATATGATCATTAGTGATTTGCCAGTTGG
CTTTTATCCTAACGATGATATTGCCAGCAGGTATCAGGTGGCTAGCTCAGATGAGCATACCTATGCCCATCATTTACTGA
TGGAGCAGGCCTTAAAGTACCTGAAAAAAGATGGTTTTGCTATTTTCTTAGCACCGGTAAATCTTTTGAGCAGCCCACAA
AGTCACCTCTTAAAACAATGGCTGAAGGGCTATGCTCAGGTTGCGGCCTTGATTACTTTGCCTGAGGCTGTGTTTGGAAA
TCCAGCTAATGCAAAATCGATTATTGTTCTTTGTAAGCAATCGAATCGCTTTGCAGAAACCTTTGTTTACCCCATTAGGG
ATTTGAAATCTGTTGATAATGTTCGTGATTTTATGGAAAACTTCAAAAATTGGAAACGGGATAATGTTATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
62.658 |
99.685 |
0.625 |
| comYH | Streptococcus mutans UA140 |
62.658 |
99.685 |
0.625 |