Detailed information NTG1119576

Bioinformatically predicted

Overview

• Name: dprA/cilB/dalA
• Type: Machinery gene
• Locus tag: EL081_RS05140
• Genome accession: NZ_LR134266
• Coordinates: 955978..956820 (+)
• Length: 280 a.a.
• NCBI ID: WP_126404221.1
• Uniprot ID: -
• Organism: Streptococcus viridans strain NCTC3166
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 950978..961820

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL081_RS05115 (NCTC3166_01016)	dapA	951885..952820 (+)	936	WP_126404217.1	4-hydroxy-tetrahydrodipicolinate synthase	-
EL081_RS05120 (NCTC3166_01017)	-	952892..953230 (+)	339	WP_006597242.1	ATP cone domain-containing protein	-
EL081_RS05125 (NCTC3166_01018)	ylqF	953355..954206 (+)	852	WP_126404218.1	ribosome biogenesis GTPase YlqF	-
EL081_RS05130 (NCTC3166_01019)	-	954193..954963 (+)	771	WP_126404219.1	ribonuclease HII	-
EL081_RS05135 (NCTC3166_01020)	-	954975..955901 (+)	927	WP_126404220.1	ROK family protein	-
EL081_RS05140 (NCTC3166_01021)	dprA/cilB/dalA	955978..956820 (+)	843	WP_126404221.1	DNA-processing protein DprA	Machinery gene
EL081_RS05145 (NCTC3166_01022)	topA	956913..959000 (+)	2088	WP_126404222.1	type I DNA topoisomerase	-
EL081_RS05150 (NCTC3166_01023)	-	959108..959785 (+)	678	WP_126404223.1	SatD family protein	-
EL081_RS05155 (NCTC3166_01024)	-	959769..960473 (+)	705	WP_126404224.1	DUF3307 domain-containing protein	-

Sequence

Protein

• Length: 280 a.a.
• Molecular weight: 31478.18 Da
• Isoelectric Point: 6.3896

>NTDB_id=1119576 EL081_RS05140 WP_126404221.1 955978..956820(+) (dprA/cilB/dalA) [Streptococcus viridans strain NCTC3166]
MNKYELYKLKVAGLSNIQVFNIVNYWEMNGEWPSLELMAKIAGCRNQTLFMERYIRIDDKVLREEFKEFDSISIMDPEYP
EELLWMHNPPVLLFYEGNIDLLKQPKIAVVGSRSCSRTGIQSVEKIINELNNELIVVSGLAKGIDAAAHYATIRNGGKTI
GVIGTGLDVFYPRSNKQLQKYMSGSHLVLTEYGPGQGPQKHHFPERNRIIAGLSRAVIVAEARMRSGSLITCERAMEEGR
DVFAIPGSILDGRSDGCHHLIQEGAKLITSGKDVLDEFEF

Nucleotide

• Length: 843 bp

>NTDB_id=1119576 EL081_RS05140 WP_126404221.1 955978..956820(+) (dprA/cilB/dalA) [Streptococcus viridans strain NCTC3166]
ATGAACAAATATGAACTTTATAAATTAAAGGTTGCTGGCCTGTCAAATATACAGGTTTTTAACATTGTCAATTACTGGGA
AATGAATGGGGAGTGGCCCTCTTTAGAATTAATGGCAAAAATTGCAGGTTGTCGCAATCAAACACTATTTATGGAACGGT
ACATTCGCATTGATGACAAGGTCTTAAGAGAAGAGTTCAAGGAGTTTGATTCGATTTCTATTATGGATCCAGAATATCCT
GAAGAACTTCTCTGGATGCATAACCCACCTGTTTTGTTGTTTTATGAAGGAAATATTGATCTTCTTAAACAGCCAAAGAT
TGCGGTTGTAGGGAGTCGATCCTGTAGCCGTACAGGGATTCAATCTGTCGAAAAAATCATTAACGAATTAAACAACGAAT
TAATTGTGGTGAGTGGGTTAGCAAAGGGGATTGATGCAGCGGCCCATTATGCTACTATTCGGAATGGAGGAAAAACAATC
GGGGTGATTGGTACTGGGTTAGATGTCTTCTATCCTAGATCCAATAAACAATTGCAGAAGTACATGAGTGGGAGCCATTT
AGTTTTAACAGAGTACGGTCCTGGACAAGGCCCTCAAAAGCACCATTTTCCAGAGCGTAATCGGATTATTGCTGGGCTTT
CCAGAGCAGTTATTGTAGCTGAAGCGCGGATGCGGTCTGGAAGTTTGATCACCTGTGAGCGTGCTATGGAAGAAGGGCGG
GATGTTTTTGCTATTCCTGGTTCAATCTTGGATGGACGTTCAGACGGCTGTCATCACCTCATTCAAGAAGGAGCAAAGCT
GATCACCAGTGGAAAAGATGTCCTAGATGAGTTTGAATTTTAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-62)

• DNA recombination-mediator protein A (DNA_processg_A) (69-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA/cilB/dalA	Streptococcus mitis SK321	67.857	100	0.679
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	67.143	100	0.671
dprA/cilB/dalA	Streptococcus pneumoniae D39	66.786	100	0.668
dprA/cilB/dalA	Streptococcus pneumoniae R6	66.786	100	0.668
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	66.786	100	0.668
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	66.786	100	0.668
dprA	Streptococcus mutans UA159	58.571	100	0.586
dprA	Lactococcus lactis subsp. cremoris KW2	53.214	100	0.532
dprA	Bacillus subtilis subsp. subtilis str. 168	38.545	98.214	0.379
dprA	Legionella pneumophila strain ERS1305867	39.098	95	0.371