Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   EL071_RS03510 Genome accession   NZ_LR134265
Coordinates   675365..676594 (+) Length   409 a.a.
NCBI ID   WP_017649189.1    Uniprot ID   A0AB38VMM8
Organism   Streptococcus agalactiae strain NCTC8184     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 670365..681594
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL071_RS03485 (NCTC8184_00675) - 671526..674105 (+) 2580 WP_115357012.1 YfhO family protein -
  EL071_RS03505 (NCTC8184_00679) rlmH 674685..675164 (-) 480 WP_000768335.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  EL071_RS03510 (NCTC8184_00680) htrA 675365..676594 (+) 1230 WP_017649189.1 trypsin-like peptidase domain-containing protein Regulator
  EL071_RS03515 (NCTC8184_00681) spo0J 676692..677465 (+) 774 WP_000456086.1 ParB/RepB/Spo0J family partition protein Regulator
  EL071_RS03520 (NCTC8184_00682) dnaA 677674..679035 (+) 1362 WP_000138202.1 chromosomal replication initiator protein DnaA -
  EL071_RS03525 (NCTC8184_00683) dnaN 679190..680326 (+) 1137 WP_000581132.1 DNA polymerase III subunit beta -
  EL071_RS03530 (NCTC8184_00684) - 680384..681277 (+) 894 WP_000987442.1 diacylglycerol kinase family protein -
  EL071_RS03535 (NCTC8184_00685) - 681287..681484 (+) 198 WP_000285197.1 DUF951 family protein -

Sequence


Protein


Download         Length: 409 a.a.        Molecular weight: 43063.51 Da        Isoelectric Point: 9.5271

>NTDB_id=1119498 EL071_RS03510 WP_017649189.1 675365..676594(+) (htrA) [Streptococcus agalactiae strain NCTC8184]
MKKKLVSSLLKCSLIIIVSFAGGAFASFVMNHNDNIPNGGVTKTSKVNYNNITPTTKAVKKVQNSVVSVINYKQQESRSD
LSDFYSHFFGNQGGNTDKGLQVYGEGSGVIYKKDGKNAYVVTNNHVIDGAKQIEIQLADGSKAVGKLVGSDTYSDLAVVK
IPSDKVSNIAEFADSSKLNIGETAIAIGSPLGTEYANSVTQGIVSSLKRTVTMTNEEGQTVSTNAIQTDAAINPGNSGGA
LINIEGQVIGINSSKISSTSNQTSGQSSGSSVEGMGFAIPSNDVVKIINQLESNGQVERPALGISMAGLSNLPSDVISKL
KIPSNVTNGIVVASIQSGMPAQGKLKKYDVITKVDDKEVASPSDLQSLLYGHQVGDSITVTFYRGENKQTVTIKLTKTSK
DLAKQRANN

Nucleotide


Download         Length: 1230 bp        

>NTDB_id=1119498 EL071_RS03510 WP_017649189.1 675365..676594(+) (htrA) [Streptococcus agalactiae strain NCTC8184]
GTGAAAAAAAAATTAGTCTCATCACTTCTAAAGTGTTCTCTAATCATTATTGTTAGCTTTGCTGGTGGAGCATTTGCTAG
TTTTGTCATGAATCATAATGACAATATTCCAAATGGTGGTGTCACTAAAACTAGTAAAGTAAATTATAATAACATAACGC
CTACAACAAAAGCTGTTAAAAAGGTACAAAATAGTGTTGTTTCTGTTATCAATTATAAACAACAAGAGAGTCGTTCTGAC
CTATCAGACTTCTATAGTCATTTTTTTGGTAATCAGGGGGGCAACACTGATAAGGGCTTACAAGTTTACGGTGAAGGCTC
TGGAGTCATCTATAAAAAAGATGGTAAAAATGCCTATGTTGTCACTAATAACCACGTCATTGATGGGGCTAAACAAATTG
AAATTCAACTAGCTGATGGCTCAAAAGCAGTTGGGAAACTTGTTGGGTCAGATACCTACTCTGATTTAGCCGTCGTCAAA
ATTCCATCAGATAAAGTTTCAAATATTGCAGAATTTGCTGATTCATCAAAACTCAACATTGGTGAAACTGCTATAGCGAT
CGGAAGCCCTCTTGGAACTGAGTATGCAAATTCTGTAACTCAAGGTATTGTATCTAGTTTAAAAAGAACTGTAACAATGA
CTAATGAAGAAGGACAAACAGTTTCTACAAATGCTATCCAGACGGATGCTGCTATCAATCCTGGTAATTCAGGTGGAGCA
CTTATCAATATTGAAGGACAGGTTATTGGAATTAATTCTAGTAAAATTTCTTCTACATCAAATCAAACCTCAGGACAATC
GTCAGGAAGTAGCGTTGAAGGTATGGGATTTGCCATTCCTTCAAATGATGTTGTTAAGATTATCAATCAACTTGAGAGTA
ACGGACAAGTAGAGAGACCTGCTCTAGGTATTTCTATGGCTGGATTAAGTAATTTACCATCCGATGTTATTAGTAAACTG
AAAATCCCAAGTAATGTTACTAATGGTATTGTAGTAGCATCTATCCAATCTGGCATGCCAGCTCAAGGCAAACTAAAGAA
ATACGATGTCATTACTAAAGTTGACGATAAAGAAGTAGCATCACCAAGTGATTTACAAAGTTTACTCTATGGCCACCAGG
TAGGGGATTCCATAACAGTAACCTTTTATCGTGGTGAAAATAAACAAACAGTCACTATAAAACTTACTAAAACTAGTAAA
GATTTAGCTAAACAACGAGCAAATAACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

63.359

96.088

0.609

  htrA Streptococcus gordonii str. Challis substr. CH1

57.357

98.044

0.562

  htrA Streptococcus mitis NCTC 12261

56.533

97.311

0.55

  htrA Streptococcus pneumoniae TIGR4

55.037

99.511

0.548

  htrA Streptococcus pneumoniae Rx1

55.037

99.511

0.548

  htrA Streptococcus pneumoniae D39

55.037

99.511

0.548

  htrA Streptococcus pneumoniae R6

55.037

99.511

0.548


Multiple sequence alignment