Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   EL071_RS03515 Genome accession   NZ_LR134265
Coordinates   676692..677465 (+) Length   257 a.a.
NCBI ID   WP_000456086.1    Uniprot ID   A0AB38VKI2
Organism   Streptococcus agalactiae strain NCTC8184     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 671692..682465
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL071_RS03505 (NCTC8184_00679) rlmH 674685..675164 (-) 480 WP_000768335.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  EL071_RS03510 (NCTC8184_00680) htrA 675365..676594 (+) 1230 WP_017649189.1 trypsin-like peptidase domain-containing protein Regulator
  EL071_RS03515 (NCTC8184_00681) spo0J 676692..677465 (+) 774 WP_000456086.1 ParB/RepB/Spo0J family partition protein Regulator
  EL071_RS03520 (NCTC8184_00682) dnaA 677674..679035 (+) 1362 WP_000138202.1 chromosomal replication initiator protein DnaA -
  EL071_RS03525 (NCTC8184_00683) dnaN 679190..680326 (+) 1137 WP_000581132.1 DNA polymerase III subunit beta -
  EL071_RS03530 (NCTC8184_00684) - 680384..681277 (+) 894 WP_000987442.1 diacylglycerol kinase family protein -
  EL071_RS03535 (NCTC8184_00685) - 681287..681484 (+) 198 WP_000285197.1 DUF951 family protein -
  EL071_RS03540 - 681651..681815 (+) 165 WP_258862141.1 helix-turn-helix transcriptional regulator -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29282.74 Da        Isoelectric Point: 9.8145

>NTDB_id=1119499 EL071_RS03515 WP_000456086.1 676692..677465(+) (spo0J) [Streptococcus agalactiae strain NCTC8184]
MEYLETININHIAPNPYQPRLEFNTKELEELADSIKINGLIQPIIVRPSAVFGYELVAGERRLRAAKLAKLESIPAIIKS
YNNDDSMQLAIVENLQRSNLSPIEEAKAYSQLLQKKSMTHEELAKYMGKSRPYISNTIRLLNLPPLITSAIEEGKLSSGH
ARALLSLPDASQQKDWYQRILTEDISVRRLEKLLKQEKKTNHKSLQNKDVFLKHQENELAQFLGSKVKLTINKDGAGNIK
IAFNNQEELNRIINTLK

Nucleotide


Download         Length: 774 bp        

>NTDB_id=1119499 EL071_RS03515 WP_000456086.1 676692..677465(+) (spo0J) [Streptococcus agalactiae strain NCTC8184]
ATGGAATATTTAGAAACGATCAACATCAATCATATTGCTCCAAATCCGTATCAACCTCGCCTAGAATTTAATACAAAAGA
ACTAGAAGAATTAGCCGACTCTATTAAAATTAATGGCCTTATTCAACCCATTATTGTAAGACCGTCAGCAGTCTTTGGTT
ACGAACTGGTAGCCGGAGAACGACGGTTAAGAGCCGCAAAGTTAGCTAAATTGGAAAGTATACCTGCAATTATAAAATCC
TATAATAATGATGATAGTATGCAATTAGCTATTGTCGAAAATTTACAACGATCTAATTTGTCACCCATTGAAGAGGCTAA
AGCCTACTCTCAACTTCTACAAAAGAAAAGTATGACACATGAAGAGTTAGCAAAATATATGGGAAAATCTCGTCCCTATA
TATCAAATACGATACGACTACTAAATTTACCGCCACTAATTACTTCAGCTATTGAAGAAGGAAAACTTTCCTCTGGTCAT
GCGCGTGCACTACTCAGTCTACCAGATGCTAGTCAACAAAAAGATTGGTATCAGAGAATCCTCACTGAAGATATTAGTGT
AAGACGACTAGAGAAGTTATTAAAACAAGAAAAGAAAACAAATCATAAGTCACTTCAAAATAAAGATGTCTTTCTAAAAC
ATCAAGAAAATGAGTTAGCTCAATTTCTAGGTAGCAAAGTGAAACTTACTATTAATAAAGATGGTGCTGGCAATATAAAG
ATTGCTTTCAATAACCAAGAAGAATTAAACAGAATTATCAACACTCTAAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-196)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.647

99.222

0.572

Multiple sequence alignment