Detailed information
Bioinformatically predicted
Overview
| Name | comYE | Type | Machinery gene |
| Locus tag | EL020_RS03700 | Genome accession | NZ_LR134203 |
| Coordinates | 706075..706368 (+) | Length | 97 a.a. |
| NCBI ID | WP_020915991.1 | Uniprot ID | - |
| Organism | Streptococcus lutetiensis strain NCTC11436 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 701075..711368
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL020_RS03675 (NCTC11436_00764) | - | 703065..703433 (+) | 369 | WP_126402407.1 | DUF1033 family protein | - |
| EL020_RS03680 (NCTC11436_00765) | comYA | 703505..704446 (+) | 942 | WP_020915987.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| EL020_RS03685 (NCTC11436_00766) | comYB | 704370..705413 (+) | 1044 | WP_231997012.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| EL020_RS03690 (NCTC11436_00767) | comYC | 705413..705706 (+) | 294 | WP_020915989.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| EL020_RS03695 (NCTC11436_00768) | comYD | 705690..706121 (+) | 432 | WP_020915990.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| EL020_RS03700 (NCTC11436_00769) | comYE | 706075..706368 (+) | 294 | WP_020915991.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| EL020_RS03705 (NCTC11436_00770) | comYF | 706352..706789 (+) | 438 | WP_043894883.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| EL020_RS03710 (NCTC11436_00771) | comGG | 706761..707111 (+) | 351 | WP_020915993.1 | competence type IV pilus minor pilin ComGG | - |
| EL020_RS03715 (NCTC11436_00772) | comYH | 707165..708121 (+) | 957 | WP_020915994.1 | class I SAM-dependent methyltransferase | Machinery gene |
| EL020_RS03720 (NCTC11436_00773) | - | 708175..709374 (+) | 1200 | WP_126402408.1 | acetate kinase | - |
| EL020_RS03725 (NCTC11436_00774) | - | 709534..709731 (+) | 198 | WP_020915996.1 | helix-turn-helix transcriptional regulator | - |
| EL020_RS03730 (NCTC11436_00775) | - | 709721..709948 (+) | 228 | WP_231997018.1 | hypothetical protein | - |
| EL020_RS03735 (NCTC11436_00776) | - | 709949..710404 (+) | 456 | WP_231853254.1 | ABC transporter permease | - |
| EL020_RS03740 (NCTC11436_00777) | - | 710419..711054 (+) | 636 | WP_058833293.1 | CPBP family intramembrane glutamic endopeptidase | - |
Sequence
Protein
Download Length: 97 a.a. Molecular weight: 10823.60 Da Isoelectric Point: 6.4795
>NTDB_id=1118955 EL020_RS03700 WP_020915991.1 706075..706368(+) (comYE) [Streptococcus lutetiensis strain NCTC11436]
MVTIKKQKLKAYILLEGLVALALLATIISLVLGEMDRSRTQMQESLHQQEVLNVATMAVQTGQDHLAINGVEVRMVKHDN
EISVYDGQNEVLHVTKN
MVTIKKQKLKAYILLEGLVALALLATIISLVLGEMDRSRTQMQESLHQQEVLNVATMAVQTGQDHLAINGVEVRMVKHDN
EISVYDGQNEVLHVTKN
Nucleotide
Download Length: 294 bp
>NTDB_id=1118955 EL020_RS03700 WP_020915991.1 706075..706368(+) (comYE) [Streptococcus lutetiensis strain NCTC11436]
GTGGTAACTATAAAAAAACAGAAACTAAAAGCTTACATACTCCTTGAGGGCTTGGTAGCTCTTGCTTTATTAGCAACGAT
TATCAGTCTGGTCTTAGGAGAAATGGACCGTAGTCGCACTCAAATGCAAGAGAGTTTGCATCAGCAAGAAGTACTTAATG
TAGCGACCATGGCCGTTCAAACAGGACAAGACCATTTGGCCATTAATGGGGTTGAGGTGCGTATGGTTAAGCATGATAAT
GAGATTTCCGTTTATGATGGGCAAAATGAGGTGCTGCATGTCACGAAAAATTAG
GTGGTAACTATAAAAAAACAGAAACTAAAAGCTTACATACTCCTTGAGGGCTTGGTAGCTCTTGCTTTATTAGCAACGAT
TATCAGTCTGGTCTTAGGAGAAATGGACCGTAGTCGCACTCAAATGCAAGAGAGTTTGCATCAGCAAGAAGTACTTAATG
TAGCGACCATGGCCGTTCAAACAGGACAAGACCATTTGGCCATTAATGGGGTTGAGGTGCGTATGGTTAAGCATGATAAT
GAGATTTCCGTTTATGATGGGCAAAATGAGGTGCTGCATGTCACGAAAAATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYE | Streptococcus mutans UA140 |
51.042 |
98.969 |
0.505 |
| comYE | Streptococcus mutans UA159 |
51.042 |
98.969 |
0.505 |
| comGE/cglE | Streptococcus pneumoniae Rx1 |
42.391 |
94.845 |
0.402 |
| comGE/cglE | Streptococcus pneumoniae D39 |
42.391 |
94.845 |
0.402 |
| comGE/cglE | Streptococcus pneumoniae R6 |
42.391 |
94.845 |
0.402 |
| comGE/cglE | Streptococcus pneumoniae TIGR4 |
42.391 |
94.845 |
0.402 |
| comGE/cglE | Streptococcus mitis SK321 |
41.304 |
94.845 |
0.392 |
| comGE/cglE | Streptococcus mitis NCTC 12261 |
41.304 |
94.845 |
0.392 |