Detailed information
Bioinformatically predicted
Overview
| Name | comR | Type | Regulator |
| Locus tag | EL020_RS03320 | Genome accession | NZ_LR134203 |
| Coordinates | 648593..649471 (+) | Length | 292 a.a. |
| NCBI ID | WP_173636488.1 | Uniprot ID | - |
| Organism | Streptococcus lutetiensis strain NCTC11436 | ||
| Function | activate transcription of comX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 643593..654471
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL020_RS03290 (NCTC11436_00686) | purD | 643652..644914 (+) | 1263 | WP_020916196.1 | phosphoribosylamine--glycine ligase | - |
| EL020_RS03295 (NCTC11436_00687) | - | 644904..645353 (+) | 450 | WP_061409292.1 | DUF523 domain-containing protein | - |
| EL020_RS03300 (NCTC11436_00688) | purE | 645353..645841 (+) | 489 | WP_020916198.1 | 5-(carboxyamino)imidazole ribonucleotide mutase | - |
| EL020_RS03305 (NCTC11436_00689) | purK | 645828..646919 (+) | 1092 | WP_126402403.1 | 5-(carboxyamino)imidazole ribonucleotide synthase | - |
| EL020_RS09800 | - | 646922..647017 (+) | 96 | Protein_646 | phosphoribosylaminoimidazole carboxylase | - |
| EL020_RS03315 (NCTC11436_00690) | purB | 647106..648404 (+) | 1299 | WP_020916200.1 | adenylosuccinate lyase | - |
| EL020_RS03320 (NCTC11436_00691) | comR | 648593..649471 (+) | 879 | WP_173636488.1 | helix-turn-helix domain-containing protein | Regulator |
| EL020_RS03325 (NCTC11436_00692) | ruvB | 649673..650671 (+) | 999 | WP_020916203.1 | Holliday junction branch migration DNA helicase RuvB | - |
| EL020_RS09560 (NCTC11436_00693) | - | 650844..651050 (+) | 207 | WP_197715893.1 | DUF7010 family protein | - |
| EL020_RS10060 (NCTC11436_00694) | - | 651010..651375 (+) | 366 | WP_231853261.1 | DUF7010 family protein | - |
| EL020_RS03335 (NCTC11436_00695) | - | 651614..652045 (+) | 432 | WP_014334179.1 | low molecular weight protein-tyrosine-phosphatase | - |
| EL020_RS03340 (NCTC11436_00696) | - | 652063..652443 (+) | 381 | WP_006531314.1 | membrane protein | - |
| EL020_RS03345 (NCTC11436_00697) | - | 652440..654233 (+) | 1794 | WP_020916207.1 | acyltransferase family protein | - |
Sequence
Protein
Download Length: 292 a.a. Molecular weight: 34469.30 Da Isoelectric Point: 4.6432
>NTDB_id=1118948 EL020_RS03320 WP_173636488.1 648593..649471(+) (comR) [Streptococcus lutetiensis strain NCTC11436]
MREEKEISREEFCGDETELSVRQLARIELNQSIPNLSKASFIANRLGVKLGTLTDGDSLELPKRYKELKYLLLRTPTYGD
QVRLDRKNDYFDEIAEVFYDVIPEEERLIIDCLQSKFDVHFSEDVNFGEGILNDYFGQVNRKKVFTINDLILIDLYFACL
SSAKKFEGIYSLNFYDDLMKRLVNQKHVSPETDLILNNVLLNNIDLAFQFKREYYIERVITISEKIMTEIHDFQRRPILS
LVEWKYYLKFKHDFALAEQSFTNATLFARLVGDTYLENKLKEEWQLDIDAVE
MREEKEISREEFCGDETELSVRQLARIELNQSIPNLSKASFIANRLGVKLGTLTDGDSLELPKRYKELKYLLLRTPTYGD
QVRLDRKNDYFDEIAEVFYDVIPEEERLIIDCLQSKFDVHFSEDVNFGEGILNDYFGQVNRKKVFTINDLILIDLYFACL
SSAKKFEGIYSLNFYDDLMKRLVNQKHVSPETDLILNNVLLNNIDLAFQFKREYYIERVITISEKIMTEIHDFQRRPILS
LVEWKYYLKFKHDFALAEQSFTNATLFARLVGDTYLENKLKEEWQLDIDAVE
Nucleotide
Download Length: 879 bp
>NTDB_id=1118948 EL020_RS03320 WP_173636488.1 648593..649471(+) (comR) [Streptococcus lutetiensis strain NCTC11436]
ATGCGGGAGGAAAAGGAAATATCACGTGAAGAATTCTGTGGGGATGAAACAGAATTATCGGTAAGACAATTAGCCAGAAT
TGAGTTGAACCAATCAATACCCAATCTCAGTAAAGCAAGCTTTATTGCCAATCGTCTGGGAGTGAAATTAGGTACCTTAA
CTGATGGTGACAGTTTAGAATTACCTAAGCGGTATAAAGAGTTGAAGTATTTACTTCTTCGAACACCTACATATGGAGAC
CAGGTACGACTTGATCGAAAAAATGACTATTTTGATGAGATTGCTGAAGTATTTTATGATGTTATTCCAGAAGAAGAACG
GTTAATCATTGATTGTTTACAATCAAAATTCGATGTTCATTTTAGTGAAGATGTCAATTTTGGAGAGGGTATTTTAAATG
ATTATTTTGGTCAAGTTAATCGAAAGAAAGTTTTTACCATTAATGATTTAATTTTGATTGATCTTTACTTTGCTTGTCTT
TCTTCTGCTAAGAAGTTTGAAGGAATTTATAGTTTGAATTTTTACGATGATTTGATGAAAAGGTTGGTAAATCAAAAGCA
TGTTTCACCTGAGACTGATTTAATTTTAAATAATGTATTGTTAAATAATATTGACTTAGCATTCCAATTTAAACGAGAAT
ATTATATTGAGCGTGTTATTACAATCAGTGAAAAAATTATGACAGAGATTCATGATTTTCAACGTCGTCCGATTTTAAGT
TTGGTGGAGTGGAAGTATTATCTGAAATTTAAACATGACTTTGCTTTAGCAGAACAGTCATTTACGAATGCAACATTATT
TGCACGATTGGTTGGCGATACTTATTTAGAAAATAAACTTAAAGAAGAATGGCAACTTGATATTGATGCTGTGGAGTAG
ATGCGGGAGGAAAAGGAAATATCACGTGAAGAATTCTGTGGGGATGAAACAGAATTATCGGTAAGACAATTAGCCAGAAT
TGAGTTGAACCAATCAATACCCAATCTCAGTAAAGCAAGCTTTATTGCCAATCGTCTGGGAGTGAAATTAGGTACCTTAA
CTGATGGTGACAGTTTAGAATTACCTAAGCGGTATAAAGAGTTGAAGTATTTACTTCTTCGAACACCTACATATGGAGAC
CAGGTACGACTTGATCGAAAAAATGACTATTTTGATGAGATTGCTGAAGTATTTTATGATGTTATTCCAGAAGAAGAACG
GTTAATCATTGATTGTTTACAATCAAAATTCGATGTTCATTTTAGTGAAGATGTCAATTTTGGAGAGGGTATTTTAAATG
ATTATTTTGGTCAAGTTAATCGAAAGAAAGTTTTTACCATTAATGATTTAATTTTGATTGATCTTTACTTTGCTTGTCTT
TCTTCTGCTAAGAAGTTTGAAGGAATTTATAGTTTGAATTTTTACGATGATTTGATGAAAAGGTTGGTAAATCAAAAGCA
TGTTTCACCTGAGACTGATTTAATTTTAAATAATGTATTGTTAAATAATATTGACTTAGCATTCCAATTTAAACGAGAAT
ATTATATTGAGCGTGTTATTACAATCAGTGAAAAAATTATGACAGAGATTCATGATTTTCAACGTCGTCCGATTTTAAGT
TTGGTGGAGTGGAAGTATTATCTGAAATTTAAACATGACTTTGCTTTAGCAGAACAGTCATTTACGAATGCAACATTATT
TGCACGATTGGTTGGCGATACTTATTTAGAAAATAAACTTAAAGAAGAATGGCAACTTGATATTGATGCTGTGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comR | Streptococcus infantarius subsp. infantarius ATCC BAA-102 |
99.315 |
100 |
0.993 |
| comR | Streptococcus mutans UA159 |
53.125 |
98.63 |
0.524 |
| comR | Streptococcus pyogenes MGAS8232 |
51.37 |
100 |
0.514 |
| comR | Streptococcus pyogenes MGAS315 |
45.89 |
100 |
0.459 |
| comR | Streptococcus suis D9 |
36.86 |
100 |
0.37 |
| comR | Streptococcus suis P1/7 |
37.153 |
98.63 |
0.366 |
| comR | Streptococcus suis 05ZYH33 |
37.153 |
98.63 |
0.366 |