Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | EL022_RS08030 | Genome accession | NZ_LR134173 |
| Coordinates | 1868448..1869047 (+) | Length | 199 a.a. |
| NCBI ID | WP_028382183.1 | Uniprot ID | A0A0W0S6S4 |
| Organism | Legionella cherrii strain NCTC11976 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1863448..1874047
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL022_RS08015 (NCTC11976_01669) | - | 1865471..1866550 (-) | 1080 | WP_051544504.1 | hypothetical protein | - |
| EL022_RS08020 (NCTC11976_01670) | pilM | 1866793..1867857 (+) | 1065 | WP_028382185.1 | pilus assembly protein PilM | Machinery gene |
| EL022_RS08025 (NCTC11976_01671) | pilN | 1867864..1868451 (+) | 588 | WP_028382184.1 | PilN domain-containing protein | Machinery gene |
| EL022_RS08030 (NCTC11976_01672) | pilO | 1868448..1869047 (+) | 600 | WP_028382183.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| EL022_RS08035 (NCTC11976_01673) | pilP | 1869044..1869574 (+) | 531 | WP_028382182.1 | pilus assembly protein PilP | Machinery gene |
| EL022_RS08040 (NCTC11976_01674) | pilQ | 1869583..1871688 (+) | 2106 | WP_028382181.1 | type IV pilus secretin PilQ | Machinery gene |
| EL022_RS08045 (NCTC11976_01675) | aroK | 1872382..1872903 (+) | 522 | WP_028382180.1 | shikimate kinase AroK | - |
| EL022_RS08050 (NCTC11976_01676) | aroB | 1872890..1873993 (+) | 1104 | WP_028382179.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 23138.00 Da Isoelectric Point: 6.2541
>NTDB_id=1118767 EL022_RS08030 WP_028382183.1 1868448..1869047(+) (pilO) [Legionella cherrii strain NCTC11976]
MNNVNLNELTLENVGQWPLVVKICVLLGVSFLIIALGYWLIIQDNFTQYSKLEGQEATLKTDFQNKQRQLYNLPAFREQL
QIMKERFVLMLKQLPEKNEMPGLLEEISKTGVASGLRFELFAPQPEVMHDFYVELPIKISVVGTYFQLAMFISRVAEMNR
IVTLHDFTIERVSSKDHKTVSEDELVMSITAKIYRYRTQ
MNNVNLNELTLENVGQWPLVVKICVLLGVSFLIIALGYWLIIQDNFTQYSKLEGQEATLKTDFQNKQRQLYNLPAFREQL
QIMKERFVLMLKQLPEKNEMPGLLEEISKTGVASGLRFELFAPQPEVMHDFYVELPIKISVVGTYFQLAMFISRVAEMNR
IVTLHDFTIERVSSKDHKTVSEDELVMSITAKIYRYRTQ
Nucleotide
Download Length: 600 bp
>NTDB_id=1118767 EL022_RS08030 WP_028382183.1 1868448..1869047(+) (pilO) [Legionella cherrii strain NCTC11976]
ATGAACAATGTCAACCTAAATGAATTAACTCTGGAAAATGTCGGACAATGGCCATTGGTGGTCAAAATCTGTGTTCTTTT
GGGTGTTAGTTTTCTAATTATTGCTTTAGGATATTGGTTGATCATTCAAGATAATTTCACTCAGTACAGTAAATTGGAGG
GGCAAGAAGCCACTTTAAAAACAGATTTTCAAAACAAGCAACGGCAATTATATAATTTACCTGCCTTTCGTGAACAACTG
CAGATTATGAAAGAGCGTTTTGTGCTAATGCTCAAGCAGCTTCCTGAAAAAAATGAGATGCCTGGCTTGTTGGAAGAAAT
TTCTAAAACAGGGGTGGCCTCAGGATTAAGGTTTGAGTTATTTGCCCCACAACCAGAAGTAATGCATGATTTTTATGTTG
AATTACCTATAAAAATTTCAGTTGTAGGAACTTATTTTCAATTGGCTATGTTTATAAGTCGAGTGGCTGAAATGAATCGA
ATTGTAACGTTACATGATTTTACTATTGAAAGGGTGTCTTCCAAGGATCATAAAACAGTCTCGGAAGATGAGTTGGTAAT
GAGCATTACTGCCAAAATATATCGATATCGCACACAATGA
ATGAACAATGTCAACCTAAATGAATTAACTCTGGAAAATGTCGGACAATGGCCATTGGTGGTCAAAATCTGTGTTCTTTT
GGGTGTTAGTTTTCTAATTATTGCTTTAGGATATTGGTTGATCATTCAAGATAATTTCACTCAGTACAGTAAATTGGAGG
GGCAAGAAGCCACTTTAAAAACAGATTTTCAAAACAAGCAACGGCAATTATATAATTTACCTGCCTTTCGTGAACAACTG
CAGATTATGAAAGAGCGTTTTGTGCTAATGCTCAAGCAGCTTCCTGAAAAAAATGAGATGCCTGGCTTGTTGGAAGAAAT
TTCTAAAACAGGGGTGGCCTCAGGATTAAGGTTTGAGTTATTTGCCCCACAACCAGAAGTAATGCATGATTTTTATGTTG
AATTACCTATAAAAATTTCAGTTGTAGGAACTTATTTTCAATTGGCTATGTTTATAAGTCGAGTGGCTGAAATGAATCGA
ATTGTAACGTTACATGATTTTACTATTGAAAGGGTGTCTTCCAAGGATCATAAAACAGTCTCGGAAGATGAGTTGGTAAT
GAGCATTACTGCCAAAATATATCGATATCGCACACAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
73.869 |
100 |
0.739 |
| comO | Acinetobacter baylyi ADP1 |
40.314 |
95.98 |
0.387 |
| pilO | Acinetobacter baumannii D1279779 |
39.378 |
96.985 |
0.382 |