Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | EL022_RS08025 | Genome accession | NZ_LR134173 |
| Coordinates | 1867864..1868451 (+) | Length | 195 a.a. |
| NCBI ID | WP_028382184.1 | Uniprot ID | A0A0W0S7E4 |
| Organism | Legionella cherrii strain NCTC11976 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1862864..1873451
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL022_RS08010 (NCTC11976_01668) | - | 1862913..1865279 (-) | 2367 | WP_028382186.1 | penicillin-binding protein 1A | - |
| EL022_RS08015 (NCTC11976_01669) | - | 1865471..1866550 (-) | 1080 | WP_051544504.1 | hypothetical protein | - |
| EL022_RS08020 (NCTC11976_01670) | pilM | 1866793..1867857 (+) | 1065 | WP_028382185.1 | pilus assembly protein PilM | Machinery gene |
| EL022_RS08025 (NCTC11976_01671) | pilN | 1867864..1868451 (+) | 588 | WP_028382184.1 | PilN domain-containing protein | Machinery gene |
| EL022_RS08030 (NCTC11976_01672) | pilO | 1868448..1869047 (+) | 600 | WP_028382183.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| EL022_RS08035 (NCTC11976_01673) | pilP | 1869044..1869574 (+) | 531 | WP_028382182.1 | pilus assembly protein PilP | Machinery gene |
| EL022_RS08040 (NCTC11976_01674) | pilQ | 1869583..1871688 (+) | 2106 | WP_028382181.1 | type IV pilus secretin PilQ | Machinery gene |
| EL022_RS08045 (NCTC11976_01675) | aroK | 1872382..1872903 (+) | 522 | WP_028382180.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 195 a.a. Molecular weight: 22661.35 Da Isoelectric Point: 6.2565
>NTDB_id=1118766 EL022_RS08025 WP_028382184.1 1867864..1868451(+) (pilN) [Legionella cherrii strain NCTC11976]
MTQINLLPWRELKREQEKKLFTIMLLVCVVAAAFIVFLINSYASGLVSNQITRNQMLQKEINAMDAQLKEIKNLEKTREM
LISRMSIVQHLQSTRTLMVHLFDELINITPSGVYLTQVEGKNDIISVLGYTESNTFVSMLMRNIENNDWLHNPVLSEIKR
EENDKDKDKEKQQSTENEFKLTFVLSPQFQIGIIL
MTQINLLPWRELKREQEKKLFTIMLLVCVVAAAFIVFLINSYASGLVSNQITRNQMLQKEINAMDAQLKEIKNLEKTREM
LISRMSIVQHLQSTRTLMVHLFDELINITPSGVYLTQVEGKNDIISVLGYTESNTFVSMLMRNIENNDWLHNPVLSEIKR
EENDKDKDKEKQQSTENEFKLTFVLSPQFQIGIIL
Nucleotide
Download Length: 588 bp
>NTDB_id=1118766 EL022_RS08025 WP_028382184.1 1867864..1868451(+) (pilN) [Legionella cherrii strain NCTC11976]
ATGACGCAGATTAACCTACTTCCCTGGCGAGAATTAAAGCGGGAACAGGAAAAAAAACTGTTTACGATCATGCTGCTTGT
GTGCGTTGTGGCTGCTGCTTTCATTGTATTTTTAATTAACTCCTATGCTTCAGGCTTAGTGAGTAATCAAATTACGCGAA
ATCAAATGCTTCAAAAAGAAATTAATGCGATGGATGCACAATTAAAAGAAATTAAAAATTTGGAAAAAACTAGAGAAATG
CTCATTTCTAGAATGTCTATAGTACAGCATTTACAATCTACGCGAACATTAATGGTTCATTTATTTGATGAGCTAATTAA
TATTACGCCATCCGGTGTCTACCTTACTCAGGTGGAAGGCAAAAATGATATCATTTCAGTCTTAGGATATACGGAGTCGA
ATACATTTGTTTCTATGTTAATGAGAAACATAGAAAATAATGATTGGCTCCATAATCCTGTCCTTAGTGAAATCAAGAGG
GAAGAAAACGATAAAGATAAGGATAAAGAGAAACAGCAATCTACTGAAAATGAATTTAAATTAACTTTTGTACTTTCCCC
TCAATTCCAGATTGGAATTATATTATGA
ATGACGCAGATTAACCTACTTCCCTGGCGAGAATTAAAGCGGGAACAGGAAAAAAAACTGTTTACGATCATGCTGCTTGT
GTGCGTTGTGGCTGCTGCTTTCATTGTATTTTTAATTAACTCCTATGCTTCAGGCTTAGTGAGTAATCAAATTACGCGAA
ATCAAATGCTTCAAAAAGAAATTAATGCGATGGATGCACAATTAAAAGAAATTAAAAATTTGGAAAAAACTAGAGAAATG
CTCATTTCTAGAATGTCTATAGTACAGCATTTACAATCTACGCGAACATTAATGGTTCATTTATTTGATGAGCTAATTAA
TATTACGCCATCCGGTGTCTACCTTACTCAGGTGGAAGGCAAAAATGATATCATTTCAGTCTTAGGATATACGGAGTCGA
ATACATTTGTTTCTATGTTAATGAGAAACATAGAAAATAATGATTGGCTCCATAATCCTGTCCTTAGTGAAATCAAGAGG
GAAGAAAACGATAAAGATAAGGATAAAGAGAAACAGCAATCTACTGAAAATGAATTTAAATTAACTTTTGTACTTTCCCC
TCAATTCCAGATTGGAATTATATTATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Legionella pneumophila strain ERS1305867 |
65.608 |
96.923 |
0.636 |