Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | ELZ62_RS03800 | Genome accession | NZ_LR134168 |
| Coordinates | 733826..734275 (+) | Length | 149 a.a. |
| NCBI ID | WP_110432056.1 | Uniprot ID | - |
| Organism | Haemophilus influenzae strain NCTC11394 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 728826..739275
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ELZ62_RS03780 (NCTC11394_00751) | rsmE | 729288..730025 (-) | 738 | WP_126507580.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
| ELZ62_RS03785 (NCTC11394_00752) | lnt | 730075..731604 (-) | 1530 | WP_126507581.1 | apolipoprotein N-acyltransferase | - |
| ELZ62_RS03790 (NCTC11394_00753) | corC | 731627..732526 (-) | 900 | WP_126507582.1 | CNNM family magnesium/cobalt transport protein CorC | - |
| ELZ62_RS03795 (NCTC11394_00754) | ampD | 733158..733712 (-) | 555 | WP_110432055.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| ELZ62_RS03800 (NCTC11394_00755) | pilA | 733826..734275 (+) | 450 | WP_110432056.1 | prepilin peptidase-dependent pilin | Machinery gene |
| ELZ62_RS03805 (NCTC11394_00756) | pilB | 734272..735666 (+) | 1395 | WP_126507583.1 | GspE/PulE family protein | Machinery gene |
| ELZ62_RS03810 (NCTC11394_00757) | pilC | 735663..736880 (+) | 1218 | WP_126507584.1 | type II secretion system F family protein | Machinery gene |
| ELZ62_RS03815 (NCTC11394_00758) | pilD | 736877..737569 (+) | 693 | WP_041175037.1 | A24 family peptidase | Machinery gene |
| ELZ62_RS03820 (NCTC11394_00759) | rho | 737625..738887 (-) | 1263 | WP_015701557.1 | transcription termination factor Rho | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 15447.72 Da Isoelectric Point: 8.4623
>NTDB_id=1118683 ELZ62_RS03800 WP_110432056.1 733826..734275(+) (pilA) [Haemophilus influenzae strain NCTC11394]
MKLTTQQTLKKGFTLIELMIVIAIIAILATIAIPSYQNYTKKAAVSELLQASAPYKADVELCVYSTGKPSTCSGGSNGIA
ADITTAKGYVKSVTTSNGAITVAGNGTLDRMSYTLTAEGDSAKGVTWTTTCKGTDASLFPANFCGSVTQ
MKLTTQQTLKKGFTLIELMIVIAIIAILATIAIPSYQNYTKKAAVSELLQASAPYKADVELCVYSTGKPSTCSGGSNGIA
ADITTAKGYVKSVTTSNGAITVAGNGTLDRMSYTLTAEGDSAKGVTWTTTCKGTDASLFPANFCGSVTQ
Nucleotide
Download Length: 450 bp
>NTDB_id=1118683 ELZ62_RS03800 WP_110432056.1 733826..734275(+) (pilA) [Haemophilus influenzae strain NCTC11394]
ATGAAATTAACAACACAGCAAACCTTGAAAAAAGGGTTTACATTAATAGAGCTAATGATTGTGATTGCAATTATTGCTAT
TTTAGCCACCATCGCAATTCCTTCTTATCAAAATTATACCAAAAAAGCTGCGGTATCCGAATTACTGCAAGCTTCTGCGC
CTTATAAGGCTGATGTGGAATTATGCGTTTATAGCACAGGCAAACCTTCTACTTGCTCAGGAGGAAGCAATGGAATTGCA
GCTGATATTACAACGGCAAAAGGCTATGTAAAATCAGTGACAACAAGCAACGGTGCAATAACAGTAGCTGGTAATGGTAC
ATTAGATAGAATGAGTTACACGCTCACGGCTGAAGGCGATAGTGCAAAAGGTGTAACTTGGACAACAACCTGCAAAGGAA
CAGATGCCTCTTTATTTCCAGCAAATTTTTGCGGAAGTGTCACACAATGA
ATGAAATTAACAACACAGCAAACCTTGAAAAAAGGGTTTACATTAATAGAGCTAATGATTGTGATTGCAATTATTGCTAT
TTTAGCCACCATCGCAATTCCTTCTTATCAAAATTATACCAAAAAAGCTGCGGTATCCGAATTACTGCAAGCTTCTGCGC
CTTATAAGGCTGATGTGGAATTATGCGTTTATAGCACAGGCAAACCTTCTACTTGCTCAGGAGGAAGCAATGGAATTGCA
GCTGATATTACAACGGCAAAAGGCTATGTAAAATCAGTGACAACAAGCAACGGTGCAATAACAGTAGCTGGTAATGGTAC
ATTAGATAGAATGAGTTACACGCTCACGGCTGAAGGCGATAGTGCAAAAGGTGTAACTTGGACAACAACCTGCAAAGGAA
CAGATGCCTCTTTATTTCCAGCAAATTTTTGCGGAAGTGTCACACAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
87.919 |
100 |
0.879 |
| pilA | Haemophilus influenzae Rd KW20 |
83.221 |
100 |
0.832 |
| pilA | Glaesserella parasuis strain SC1401 |
58.389 |
100 |
0.584 |
| pilA2 | Legionella pneumophila str. Paris |
41.216 |
99.329 |
0.409 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
41.216 |
99.329 |
0.409 |