Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   ELZ51_RS11055 Genome accession   NZ_LR134094
Coordinates   2199553..2200773 (+) Length   406 a.a.
NCBI ID   WP_003048956.1    Uniprot ID   A0A380JYG2
Organism   Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2194553..2205773
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ51_RS11030 (NCTC4669_02323) - 2195500..2198106 (+) 2607 WP_126427578.1 YfhO family protein -
  ELZ51_RS11050 (NCTC4669_02327) rlmH 2198864..2199343 (-) 480 WP_003053217.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ELZ51_RS11055 (NCTC4669_02328) htrA 2199553..2200773 (+) 1221 WP_003048956.1 S1C family serine protease Regulator
  ELZ51_RS11060 (NCTC4669_02329) spo0J 2200888..2201661 (+) 774 WP_115253230.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 406 a.a.        Molecular weight: 42695.23 Da        Isoelectric Point: 6.3566

>NTDB_id=1118307 ELZ51_RS11055 WP_003048956.1 2199553..2200773(+) (htrA) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
MPSMKHILKSLGILLIGFLGGLLAIFTFNATQQSSSTSHTSSATMSKMVFNNTTDTTKAVKVVQNAVVSVINYQADPSSS
LSNPYTKLFGENPAREDKDSELTVFAQGSGVIYRKDSNHAYVVTNNHVIDGAKRIEILMADGTKVVGELIGADTYSDLAV
VKISSDKIKTVAEFADSTKLNVGETAIAIGSPLGTQYANSVTKGIVSSLSRTVTLKNEDGETVSTNAIQTDAAINPGNSG
GPLINIEGQVIGINSSKISSTPSGINGNSGAVEGISFAIPSNDVIKIIKQLETNGEVIRPALGISMVNLNDLSTNALSQI
NIPTSITGGIVVGSVQEGMPASGKLAQYDVITEIDGKAVNSISDLQSSLYGHDINDTIKVTFYRGTTKKKTDITLTKTTQ
DLTKKQ

Nucleotide


Download         Length: 1221 bp        

>NTDB_id=1118307 ELZ51_RS11055 WP_003048956.1 2199553..2200773(+) (htrA) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
ATGCCATCTATGAAACATATCTTAAAATCCTTAGGCATTTTACTCATTGGATTTTTAGGAGGATTGTTAGCAATTTTCAC
TTTTAATGCTACTCAACAGTCTTCCTCTACCTCACATACTAGTAGTGCGACGATGAGTAAGATGGTTTTTAATAATACTA
CTGACACAACAAAAGCGGTTAAAGTCGTCCAAAACGCAGTAGTATCAGTGATTAACTATCAAGCAGATCCTTCTTCATCT
CTTTCTAATCCTTACACAAAACTCTTTGGAGAAAATCCAGCAAGAGAAGATAAAGATTCCGAATTAACAGTTTTTGCTCA
AGGTTCTGGTGTCATTTATCGAAAAGATTCCAATCATGCCTATGTTGTGACTAATAATCATGTTATTGACGGCGCAAAAC
GAATTGAAATTCTTATGGCAGATGGAACTAAGGTAGTAGGAGAATTAATTGGTGCGGATACTTATTCTGACTTAGCTGTA
GTTAAAATTTCTTCAGATAAGATTAAAACAGTAGCTGAATTTGCAGATTCTACTAAACTTAATGTTGGAGAAACTGCTAT
TGCTATTGGTAGTCCACTGGGAACTCAATACGCAAACTCAGTTACGAAAGGAATTGTATCGAGCCTAAGTCGTACCGTTA
CCTTAAAAAACGAAGATGGAGAAACTGTTTCAACAAATGCTATCCAAACAGATGCTGCTATTAACCCCGGAAATTCTGGG
GGACCACTAATTAATATAGAAGGACAGGTTATCGGTATTAATTCAAGTAAGATTTCTTCTACTCCATCTGGTATTAATGG
GAATAGTGGAGCTGTCGAAGGAATTAGCTTTGCTATTCCATCTAATGATGTCATTAAAATCATTAAGCAATTAGAAACCA
ACGGTGAAGTCATACGACCTGCTCTTGGTATCTCTATGGTTAACCTAAATGATTTATCAACTAATGCTCTTAGTCAAATT
AATATCCCAACTAGTATCACTGGCGGCATTGTGGTTGGTTCTGTTCAAGAGGGAATGCCAGCAAGTGGTAAACTTGCCCA
GTACGATGTCATTACAGAAATTGATGGGAAAGCTGTTAATTCAATAAGTGATCTTCAAAGTAGTCTATATGGCCATGACA
TTAACGATACCATCAAGGTAACCTTTTATAGAGGGACAACCAAGAAAAAAACAGATATTACCTTAACTAAAACAACTCAG
GATTTGACCAAAAAACAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A380JYG2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

59.204

99.015

0.586

  htrA Streptococcus mitis NCTC 12261

54.054

100

0.542

  htrA Streptococcus pneumoniae Rx1

54.054

100

0.542

  htrA Streptococcus pneumoniae TIGR4

54.054

100

0.542

  htrA Streptococcus pneumoniae D39

54.054

100

0.542

  htrA Streptococcus pneumoniae R6

54.054

100

0.542

  htrA Streptococcus gordonii str. Challis substr. CH1

54.208

99.507

0.539


Multiple sequence alignment