Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   ELZ51_RS11060 Genome accession   NZ_LR134094
Coordinates   2200888..2201661 (+) Length   257 a.a.
NCBI ID   WP_115253230.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2195888..2206661
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ51_RS11050 (NCTC4669_02327) rlmH 2198864..2199343 (-) 480 WP_003053217.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ELZ51_RS11055 (NCTC4669_02328) htrA 2199553..2200773 (+) 1221 WP_003048956.1 S1C family serine protease Regulator
  ELZ51_RS11060 (NCTC4669_02329) spo0J 2200888..2201661 (+) 774 WP_115253230.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 28976.84 Da        Isoelectric Point: 9.8968

>NTDB_id=1118308 ELZ51_RS11060 WP_115253230.1 2200888..2201661(+) (spo0J) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
MTELLKSIPIEDIVANPYQPRLQFNQKELEDLANSIKTNGLIQPIIVRKSDIFGYELVAGERRFKASKMAGLTKVPAIVK
NMSSLESMQQAIVENLQRADLNPIEEAKAYQLLIEKNQMTHEEVAKYMGKSRPYISNTLRLLQLPKIISKAVEEGDISAG
HARALLTLTDEKEQLVYANRIKNEGLSVRQIEHMVTPKLKSIPIPKNKNIFITSLEDQLAQSLGLPVKIKLKSTQSGQLL
LPFANQEELNRIINKLL

Nucleotide


Download         Length: 774 bp        

>NTDB_id=1118308 ELZ51_RS11060 WP_115253230.1 2200888..2201661(+) (spo0J) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
ATGACTGAACTATTGAAATCTATTCCAATTGAAGATATTGTAGCCAATCCCTATCAACCAAGGCTTCAGTTTAATCAAAA
AGAACTAGAAGATTTGGCTAATTCAATCAAGACAAATGGACTTATTCAACCTATTATTGTTCGAAAATCTGACATCTTTG
GTTATGAATTAGTTGCAGGAGAACGACGCTTTAAGGCTTCTAAAATGGCTGGGCTAACAAAAGTACCTGCTATTGTCAAA
AACATGTCCTCTTTGGAAAGTATGCAACAAGCTATCGTAGAAAATTTGCAACGTGCTGATTTGAATCCCATTGAAGAAGC
AAAAGCTTATCAGCTACTGATTGAAAAAAATCAAATGACGCATGAAGAGGTTGCCAAATATATGGGAAAATCAAGACCTT
ATATTAGCAATACTTTACGCCTACTGCAACTTCCGAAAATAATTAGTAAAGCAGTAGAAGAAGGAGACATTAGTGCAGGA
CACGCGCGTGCTCTTCTCACACTAACAGACGAAAAGGAACAGTTAGTTTACGCTAATAGAATCAAAAATGAAGGGTTAAG
TGTACGACAAATTGAGCATATGGTAACTCCAAAACTTAAAAGTATTCCTATCCCAAAAAATAAAAATATTTTTATCACCT
CTTTAGAAGATCAGCTGGCCCAATCTCTAGGGTTACCAGTCAAAATCAAATTGAAATCAACTCAAAGTGGTCAATTGCTG
TTACCATTTGCTAACCAAGAGGAACTAAACAGAATTATCAACAAGCTACTTTAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(148-195)

ParB/Sulfiredoxin domain (ParB_N)

(7-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.203

99.611

0.58

Multiple sequence alignment